{
    "type": "genome",
    "identifier": "GCA_009694635.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Evolutionary Genomics Group",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_009694635.1",
        "bioproject": "PRJNA521725",
        "biosample": "SAMN10915621",
        "wgs_master": "SHUJ00000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "Baikal-deep-G3",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/11/22",
        "asm_name": "ASM969463v1",
        "submitter": "Evolutionary Genomics Group",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/694/635/GCA_009694635.1_ASM969463v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-11-22",
    "dateModified": "2019-11-22",
    "datePublished": "2019-11-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Lake Baikal"
        ],
        "sample_host_location_id": [],
        "data_size": "0.781 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 45.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2799611",
        "Number of Sequences": "281",
        "Longest Sequences (bp)": "55361",
        "N50 (bp)": "10717",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.0",
        "Number of CDSs": "2412",
        "Average Protein Length": "312.0",
        "Coding Ratio (%)": "80.7",
        "Number of rRNAs": "1",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Luteitalea pratensis",
                "strain": "strain=DSM 100886; HEG_-6_39",
                "accession": "GCA_001618865.1",
                "taxid": 1855912,
                "species_taxid": 1855912,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9238,
                "matched_fragments": 111,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoallomurus purpureus",
                "strain": "strain=KCTC 19541",
                "accession": "GCA_024055795.1",
                "taxid": 478114,
                "species_taxid": 478114,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6436,
                "matched_fragments": 52,
                "total_fragments": 780,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 45.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_009694735.1",
                "gtdb_species": "s__12-FULL-67-14b sp009694735",
                "ani": 88.8203,
                "matched_fragments": 174,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002737365.1",
                "gtdb_species": "s__12-FULL-67-14b sp002737365",
                "ani": 79.1904,
                "matched_fragments": 133,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.27",
                "min_intra_species_ani": "96.58",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_016213695.1",
                "gtdb_species": "s__Gp6-AA40 sp016213695",
                "ani": 78.7688,
                "matched_fragments": 347,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016192845.1",
                "gtdb_species": "s__Gp6-AA40 sp016192845",
                "ani": 78.5455,
                "matched_fragments": 335,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001767195.1",
                "gtdb_species": "s__Gp6-AA40 sp001767195",
                "ani": 78.4231,
                "matched_fragments": 250,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.78",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001767525.1",
                "gtdb_species": "s__Gp6-AA40 sp001767525",
                "ani": 78.3567,
                "matched_fragments": 318,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.96",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016184455.1",
                "gtdb_species": "s__Gp6-AA40 sp016184455",
                "ani": 78.0675,
                "matched_fragments": 329,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013140775.1",
                "gtdb_species": "s__Gp6-AA40 sp013140775",
                "ani": 77.5577,
                "matched_fragments": 191,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003222635.1",
                "gtdb_species": "s__Gp6-AA40 sp003222635",
                "ani": 77.538,
                "matched_fragments": 246,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA40",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.94",
                "min_intra_species_ani": "98.94",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013140955.1",
                "gtdb_species": "s__JABFRY01 sp013140955",
                "ani": 77.0343,
                "matched_fragments": 108,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__JABFRY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016871275.1",
                "gtdb_species": "s__12-FULL-67-14b sp016871275",
                "ani": 76.9886,
                "matched_fragments": 127,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016871255.1",
                "gtdb_species": "s__VFZH01 sp016871255",
                "ani": 76.9296,
                "matched_fragments": 131,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__VFZH01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017883165.1",
                "gtdb_species": "s__JADGOC01 sp017883165",
                "ani": 76.5506,
                "matched_fragments": 118,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__JADGOC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016789705.1",
                "gtdb_species": "s__CADEFD01 sp016789705",
                "ani": 76.5246,
                "matched_fragments": 136,
                "total_fragments": 780,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__CADEFD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA2999",
        "g__Gp6-AA40",
        "s__"
    ],
    "_genome_taxon": [
        "Acidobacteriota",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__UBA2999",
        "g__Gp6-AA40",
        "s__",
        "Bacteria",
        "Acidobacteriota",
        "Vicinamibacteria",
        "Vicinamibacterales",
        "UBA2999",
        "Gp6-AA40",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}