{
    "type": "genome",
    "identifier": "GCA_009775685.1",
    "organism": "Bacteroides sp.",
    "title": "Bacteroides sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_009775685.1",
        "bioproject": "PRJNA544874",
        "biosample": "SAMN12406343",
        "wgs_master": "VSQD00000000.1",
        "refseq_category": "na",
        "taxid": "29523",
        "species_taxid": "29523",
        "organism_name": "Bacteroides sp.",
        "infraspecific_name": "",
        "isolate": "SC1114_S20_bin.4",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/12/20",
        "asm_name": "ASM977568v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/775/685/GCA_009775685.1_ASM977568v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-12-20",
    "dateModified": "2019-12-20",
    "datePublished": "2019-12-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroides sp."
        ],
        "sample_taxid": [
            "29523"
        ],
        "sample_host_organism": [
            "Mus musculus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Brisbane"
        ],
        "sample_host_location_id": [],
        "data_size": "1.121 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3905793",
        "Number of Sequences": "325",
        "Longest Sequences (bp)": "82129",
        "N50 (bp)": "21919",
        "Gap Ratio (%)": "0.006657",
        "GCcontent (%)": "46.6",
        "Number of CDSs": "2972",
        "Average Protein Length": "351.8",
        "Coding Ratio (%)": "80.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Bacteroides muris",
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                "species_taxid": 2937417,
                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Bacteroides uniformis",
                "strain": "strain=FDAARGOS_901",
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                "species_taxid": 820,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.3036,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides uniformis",
                "strain": "strain=ATCC 8492",
                "accession": "GCA_025147485.1",
                "taxid": 820,
                "species_taxid": 820,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.2896,
                "matched_fragments": 826,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides uniformis",
                "strain": "strain=ATCC 8492",
                "accession": "GCA_000154205.1",
                "taxid": 820,
                "species_taxid": 820,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.2772,
                "matched_fragments": 837,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides uniformis",
                "strain": "strain=DSM 6597",
                "accession": "GCA_900107315.1",
                "taxid": 820,
                "species_taxid": 820,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.2628,
                "matched_fragments": 826,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides humanifaecis",
                "strain": "strain=KGMB07931",
                "accession": "GCA_017309675.2",
                "taxid": 2792859,
                "species_taxid": 2792859,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.088,
                "matched_fragments": 808,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides rodentium",
                "strain": "strain=JCM 16496",
                "accession": "GCA_000614125.1",
                "taxid": 691816,
                "species_taxid": 691816,
                "relation_to_type": "type",
                "validated": true,
                "ani": 90.958,
                "matched_fragments": 789,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides stercoris",
                "strain": "strain=ATCC 43183",
                "accession": "GCA_025147325.1",
                "taxid": 46506,
                "species_taxid": 46506,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 80.7827,
                "matched_fragments": 489,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bacteroides stercorirosoris",
                "strain": "strain=JCM 17103",
                "accession": "GCA_000614165.1",
                "taxid": 871324,
                "species_taxid": 871324,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.4855,
                "matched_fragments": 442,
                "total_fragments": 1132,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.45,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_004793475.1",
                "gtdb_species": "s__Bacteroides sp002491635",
                "ani": 98.6636,
                "matched_fragments": 1003,
                "total_fragments": 1132,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "98.46",
                "mean_intra_species_af": "0.94",
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                "num_clustered_genomes": 13,
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            },
            {
                "accession": "GCF_000154205.1",
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                "total_fragments": 1132,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.42",
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                "num_clustered_genomes": 301,
                "status": "-"
            },
            {
                "accession": "GCF_000614125.1",
                "gtdb_species": "s__Bacteroides rodentium",
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                "matched_fragments": 789,
                "total_fragments": 1132,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_905197435.1",
                "gtdb_species": "s__Bacteroides sp905197435",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000195635.1",
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                "matched_fragments": 575,
                "total_fragments": 1132,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902388495.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides",
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                "min_intra_species_ani": "99.99",
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            },
            {
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            {
                "accession": "GCF_000155815.1",
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            },
            {
                "accession": "GCF_004342845.1",
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            },
            {
                "accession": "GCF_000186225.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.136,
        "cell_length": 0.217,
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        "coding_genes": 3969.717,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
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        "f__Bacteroidaceae",
        "g__Bacteroides",
        "s__Bacteroides muris"
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    "_genome_taxon": [
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        "p__Bacteroidota",
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        "o__Bacteroidales",
        "f__Bacteroidaceae",
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        "s__Bacteroides muris",
        "Bacteria",
        "Bacteroidota",
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        "Bacteroidales",
        "Bacteroidaceae",
        "Bacteroides",
        "Bacteroides",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}