{
    "type": "genome",
    "identifier": "GCA_009844005.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_009844005.1",
        "bioproject": "PRJNA555144",
        "biosample": "SAMN12598627",
        "wgs_master": "VYCI00000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "SB0675_bin_12",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/01/09",
        "asm_name": "ASM984400v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/844/005/GCA_009844005.1_ASM984400v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-01-09",
    "dateModified": "2020-01-09",
    "datePublished": "2020-01-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [
            "Ircinia ramosa"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Great Barrier Reef"
        ],
        "sample_host_location_id": [],
        "data_size": "0.994 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3617733",
        "Number of Sequences": "128",
        "Longest Sequences (bp)": "128133",
        "N50 (bp)": "51062",
        "Gap Ratio (%)": "0.007740",
        "GCcontent (%)": "69.1",
        "Number of CDSs": "2981",
        "Average Protein Length": "359.8",
        "Coding Ratio (%)": "88.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 161493,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysobacter enzymogenes",
                "strain": "strain=ATCC 29487",
                "accession": "GCA_900106525.1",
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                "species_taxid": 69,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea roseoviolacea subsp. carminata",
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                "accession": "GCA_024172185.1",
                "taxid": 160689,
                "species_taxid": 103837,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura algeriensis",
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                "accession": "GCA_014873935.1",
                "taxid": 1679523,
                "species_taxid": 1679523,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Nonomuraea montanisoli",
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                "accession": "GCA_013363975.1",
                "taxid": 2741721,
                "species_taxid": 2741721,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis arida",
                "strain": "strain=DSM 45648",
                "accession": "GCA_004365925.1",
                "taxid": 587909,
                "species_taxid": 587909,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis arida",
                "strain": "strain=CGMCC 4.5579",
                "accession": "GCA_900115565.1",
                "taxid": 587909,
                "species_taxid": 587909,
                "relation_to_type": "type",
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                "ani": 74.7,
                "matched_fragments": 103,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Falsiroseomonas frigidaquae",
                "strain": "strain=JCM 15073",
                "accession": "GCA_012163145.1",
                "taxid": 487318,
                "species_taxid": 487318,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.688,
                "matched_fragments": 70,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura montaniterrae",
                "strain": "strain=CYP1-1B",
                "accession": "GCA_008923365.1",
                "taxid": 1803903,
                "species_taxid": 1803903,
                "relation_to_type": "type",
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                "matched_fragments": 155,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Frankia asymbiotica",
                "strain": "strain=NRRL B-16386",
                "accession": "GCA_001983105.1",
                "taxid": 1834516,
                "species_taxid": 1834516,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6255,
                "matched_fragments": 130,
                "total_fragments": 1145,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Bin61;f__Bin61;g__Bin61",
                "ani_circumscription_radius": 95.0,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Bin61;f__Bin61;g__Bin61",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
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                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002238705.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Bin61;f__Bin61;g__Bin61",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_012271265.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Bin61;f__Bin61;g__Bin61",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_011523485.1",
                "gtdb_species": "s__WTFV01 sp011523485",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__WTFV01",
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            },
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                "accession": "GCA_011523845.1",
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            },
            {
                "accession": "GCA_011526565.1",
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            },
            {
                "accession": "GCA_016865485.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Marinacidobacterales",
        "f__Marinacidobacteraceae",
        "g__Marinacidobacterium",
        "s__Marinacidobacterium portitor"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Marinacidobacterales",
        "f__Marinacidobacteraceae",
        "g__Marinacidobacterium",
        "s__Marinacidobacterium portitor",
        "Bacteria",
        "Acidobacteriota",
        "Vicinamibacteria",
        "Marinacidobacterales",
        "Marinacidobacteraceae",
        "Marinacidobacterium",
        "Marinacidobacterium",
        "portitor"
    ],
    "_meo": [
        {
            "id": "MEO_0002677",
            "label": "sponge"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}