{
    "type": "genome",
    "identifier": "GCA_009921285.1",
    "organism": "Bacteroidota bacterium",
    "title": "Bacteroidota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_009921285.1",
        "bioproject": "PRJNA495371",
        "biosample": "SAMN10223032",
        "wgs_master": "RFYD00000000.1",
        "refseq_category": "na",
        "taxid": "1898104",
        "species_taxid": "1898104",
        "organism_name": "Bacteroidota bacterium",
        "infraspecific_name": "",
        "isolate": "WB5_3B_010",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/01/23",
        "asm_name": "ASM992128v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/921/285/GCA_009921285.1_ASM992128v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-01-23",
    "dateModified": "2020-01-23",
    "datePublished": "2020-01-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidota bacterium"
        ],
        "sample_taxid": [
            "1898104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Chattahoochee River"
        ],
        "sample_host_location_id": [],
        "data_size": "0.616 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 2584.0,
            "max": 2584.0
        },
        "completeness": 95.83,
        "contamination": 0.46,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2147036",
        "Number of Sequences": "329",
        "Longest Sequences (bp)": "52562",
        "N50 (bp)": "11494",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "46.4",
        "Number of CDSs": "1647",
        "Average Protein Length": "324.9",
        "Coding Ratio (%)": "74.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "25",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.46,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005788145.1",
                "gtdb_species": "s__UBA955 sp005788145",
                "ani": 96.2505,
                "matched_fragments": 406,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.27",
                "min_intra_species_ani": "95.94",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002293105.1",
                "gtdb_species": "s__UBA955 sp002293105",
                "ani": 85.9441,
                "matched_fragments": 401,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "98.13",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 10,
                "status": "-"
            },
            {
                "accession": "GCA_016868785.1",
                "gtdb_species": "s__UBA955 sp016868785",
                "ani": 81.3248,
                "matched_fragments": 372,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002737625.1",
                "gtdb_species": "s__UBA955 sp002737625",
                "ani": 78.8457,
                "matched_fragments": 152,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.97",
                "min_intra_species_ani": "95.99",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903959115.1",
                "gtdb_species": "s__UBA955 sp903959115",
                "ani": 78.832,
                "matched_fragments": 189,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.58",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002347985.1",
                "gtdb_species": "s__UBA955 sp002347985",
                "ani": 78.5814,
                "matched_fragments": 214,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.54",
                "min_intra_species_ani": "99.54",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_005798825.1",
                "gtdb_species": "s__UBA955 sp005798825",
                "ani": 77.7151,
                "matched_fragments": 58,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.82",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002737705.1",
                "gtdb_species": "s__UBA955 sp002737705",
                "ani": 76.5242,
                "matched_fragments": 65,
                "total_fragments": 539,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__NS11-12g;f__UBA955;g__UBA955",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "99.19",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__NS11-12g",
        "f__UBA955",
        "g__UBA955",
        "s__UBA955 sp005788145"
    ],
    "_genome_taxon": [
        "Bacteroidota",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__NS11-12g",
        "f__UBA955",
        "g__UBA955",
        "s__UBA955 sp005788145",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "NS11-12g",
        "UBA955",
        "UBA955",
        "UBA955",
        "sp005788145"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}