{
    "type": "genome",
    "identifier": "GCA_009921775.1",
    "organism": "Acetobacteraceae bacterium",
    "title": "Acetobacteraceae bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Georgia Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_009921775.1",
        "bioproject": "PRJNA495371",
        "biosample": "SAMN10223006",
        "wgs_master": "RFXD00000000.1",
        "refseq_category": "na",
        "taxid": "1909293",
        "species_taxid": "1909293",
        "organism_name": "Acetobacteraceae bacterium",
        "infraspecific_name": "",
        "isolate": "WB5_3A_101",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/01/23",
        "asm_name": "ASM992177v1",
        "submitter": "Georgia Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/921/775/GCA_009921775.1_ASM992177v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-01-23",
    "dateModified": "2020-01-23",
    "datePublished": "2020-01-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acetobacteraceae bacterium"
        ],
        "sample_taxid": [
            "1909293"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Chattahoochee River"
        ],
        "sample_host_location_id": [],
        "data_size": "0.777 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 10.42,
        "strain_heterogeneity": 66.67,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2765384",
        "Number of Sequences": "977",
        "Longest Sequences (bp)": "18400",
        "N50 (bp)": "3488",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.0",
        "Number of CDSs": "1918",
        "Average Protein Length": "274.6",
        "Coding Ratio (%)": "57.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Roseomonas alkaliterrae",
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                "accession": "GCA_014199195.1",
                "taxid": 1452450,
                "species_taxid": 1452450,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2246,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas rubea",
                "strain": "strain=MO17",
                "accession": "GCA_016106015.1",
                "taxid": 2748666,
                "species_taxid": 2748666,
                "relation_to_type": "type",
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                "ani": 77.186,
                "matched_fragments": 131,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas lacus",
                "strain": "strain=CGMCC 1.3617",
                "accession": "GCA_014644535.1",
                "taxid": 287609,
                "species_taxid": 287609,
                "relation_to_type": "type",
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                "ani": 77.1293,
                "matched_fragments": 148,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas oryzicola",
                "strain": "strain=KCTC 22478",
                "accession": "GCA_012163135.1",
                "taxid": 535904,
                "species_taxid": 535904,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8633,
                "matched_fragments": 136,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia rosea",
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                "accession": "GCA_900104205.1",
                "taxid": 938405,
                "species_taxid": 938405,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7274,
                "matched_fragments": 87,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas deserti",
                "strain": "strain=M3",
                "accession": "GCA_001982615.1",
                "taxid": 1817963,
                "species_taxid": 1817963,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6264,
                "matched_fragments": 70,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas hellenica",
                "strain": "strain=LMG 31523",
                "accession": "GCA_018129085.1",
                "taxid": 2687306,
                "species_taxid": 2687306,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6001,
                "matched_fragments": 107,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas gilardii subsp. rosea",
                "strain": "strain=NCTC13290",
                "accession": "GCA_900455865.1",
                "taxid": 243956,
                "species_taxid": 257708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.558,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas oryzae",
                "strain": "strain=KCTC 42542",
                "accession": "GCA_008386565.1",
                "taxid": 1608942,
                "species_taxid": 1608942,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5556,
                "matched_fragments": 79,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas harenae",
                "strain": "strain=CPCC 101081",
                "accession": "GCA_009848505.1",
                "taxid": 2692566,
                "species_taxid": 2692566,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5465,
                "matched_fragments": 57,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas ludipueritiae",
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                "accession": "GCA_014490445.1",
                "taxid": 198093,
                "species_taxid": 198093,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 76,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas marmotae",
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                "accession": "GCA_017654485.1",
                "taxid": 2768161,
                "species_taxid": 2768161,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.469,
                "matched_fragments": 65,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas gilardii subsp. rosea",
                "strain": "strain=ATCC BAA-691",
                "accession": "GCA_000518625.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4568,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas vastitatis",
                "strain": "strain=CPCC 101021",
                "accession": "GCA_003604215.1",
                "taxid": 2307076,
                "species_taxid": 2307076,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.344,
                "matched_fragments": 69,
                "total_fragments": 428,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 10.42,
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        "gtdb_result": [
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                "accession": "GCA_903844785.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas_B",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_903927465.1",
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            },
            {
                "accession": "GCA_016869735.1",
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCA_001464375.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "cell_length": 0.155,
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        "bacillus_cell_shape": 0.711,
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    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Acetobacterales",
        "f__Acetobacteraceae",
        "g__Neoroseomonas",
        "s__"
    ],
    "_genome_taxon": [
        "Acetobacteraceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Acetobacterales",
        "f__Acetobacteraceae",
        "g__Neoroseomonas",
        "s__",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Acetobacterales",
        "Acetobacteraceae",
        "Neoroseomonas",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}