{ "type": "genome", "identifier": "GCA_010672005.1", "organism": "Moorena sp. SIO4A5", "title": "Moorena sp. SIO4A5", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "UCSD", "publication": [ {} ], "properties": { "assembly_accession": "GCA_010672005.1", "bioproject": "PRJNA558979", "biosample": "SAMN12797973", "wgs_master": "JAAHHZ000000000.1", "refseq_category": "na", "taxid": "2607838", "species_taxid": "2607838", "organism_name": "Moorena sp. SIO4A5", "infraspecific_name": "", "isolate": "SIO4A5", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/02/16", "asm_name": "ASM1067200v1", "submitter": "UCSD", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/010/672/005/GCA_010672005.1_ASM1067200v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-02-16", "dateModified": "2020-02-16", "datePublished": "2020-02-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Moorena sp. SIO4A5" ], "sample_taxid": [ "2607838" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Papua New Guinea: Hoia Bay" ], "sample_host_location_id": [], "data_size": "2.445 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 93.75, "contamination": 5.09, "strain_heterogeneity": 66.67, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "8675040", "Number of Sequences": "604", "Longest Sequences (bp)": "392460", "N50 (bp)": "34968", "Gap Ratio (%)": "0.048484", "GCcontent (%)": "43.5", "Number of CDSs": "6394", "Average Protein Length": "306.1", "Coding Ratio (%)": "67.7", "Number of rRNAs": "3", "Number of tRNAs": "62", "Number of CRISPRs": "7" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Moorena producens", "strain": "strain=3L", 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75.613, "matched_fragments": 102, "total_fragments": 2647, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kovacikia minuta", "strain": "strain=CCNU0001", "accession": "GCA_020091585.1", "taxid": 2931930, "species_taxid": 2931930, "relation_to_type": "type", "validated": true, "ani": 75.5607, "matched_fragments": 64, "total_fragments": 2647, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crocosphaera chwakensis", "strain": "strain=CCY0110", "accession": "GCA_000169335.1", "taxid": 2546361, "species_taxid": 2546361, "relation_to_type": "type", "validated": true, "ani": 75.5157, "matched_fragments": 67, "total_fragments": 2647, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crocosphaera watsonii", "strain": "strain=WH 8501", "accession": "GCA_000167195.1", "taxid": 263511, "species_taxid": 263511, "relation_to_type": "suspected-type", "validated": true, "ani": 75.4467, "matched_fragments": 70, "total_fragments": 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