{
    "type": "genome",
    "identifier": "GCA_011048485.1",
    "organism": "Candidatus Aminicenantes bacterium",
    "title": "Candidatus Aminicenantes bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_011048485.1",
        "bioproject": "PRJNA480137",
        "biosample": "SAMN09639150",
        "wgs_master": "DSDX00000000.1",
        "refseq_category": "na",
        "taxid": "2052149",
        "species_taxid": "2052149",
        "organism_name": "Candidatus Aminicenantes bacterium",
        "infraspecific_name": "",
        "isolate": "SpSt-1229",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/02",
        "asm_name": "ASM1104848v1",
        "submitter": "The University of Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/048/485/GCA_011048485.1_ASM1104848v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-02",
    "dateModified": "2020-03-02",
    "datePublished": "2020-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Aminicenantes bacterium"
        ],
        "sample_taxid": [
            "2052149"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Zodletone Spring, Oklahoma"
        ],
        "sample_host_location_id": [],
        "data_size": "0.565 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 78.99,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2045217",
        "Number of Sequences": "409",
        "Longest Sequences (bp)": "27785",
        "N50 (bp)": "5319",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.5",
        "Number of CDSs": "1390",
        "Average Protein Length": "323.3",
        "Coding Ratio (%)": "65.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "26",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 78.99,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_011048485.1",
                "gtdb_species": "s__RBG-16-66-30 sp011048485",
                "ani": 99.9999,
                "matched_fragments": 470,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.98",
                "min_intra_species_ani": "97.98",
                "mean_intra_species_af": "0.65",
                "min_intra_species_af": "0.65",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017999365.1",
                "gtdb_species": "s__RBG-16-66-30 sp012516875",
                "ani": 82.6711,
                "matched_fragments": 315,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.63",
                "min_intra_species_ani": "99.63",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001775715.1",
                "gtdb_species": "s__RBG-16-66-30 sp001775715",
                "ani": 82.4334,
                "matched_fragments": 225,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001775755.1",
                "gtdb_species": "s__RBG-16-66-30 sp001775755",
                "ani": 82.0895,
                "matched_fragments": 280,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.12",
                "min_intra_species_ani": "99.12",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017883305.1",
                "gtdb_species": "s__RBG-16-66-30 sp017883305",
                "ani": 81.9031,
                "matched_fragments": 277,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014894455.1",
                "gtdb_species": "s__RBG-16-66-30 sp014894455",
                "ani": 80.9955,
                "matched_fragments": 295,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001773855.1",
                "gtdb_species": "s__RBG-16-66-30 sp001773855",
                "ani": 80.7569,
                "matched_fragments": 178,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016867635.1",
                "gtdb_species": "s__RBG-16-66-30 sp016867635",
                "ani": 80.1719,
                "matched_fragments": 249,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016867615.1",
                "gtdb_species": "s__JAFGAV01 sp016867615",
                "ani": 77.2757,
                "matched_fragments": 61,
                "total_fragments": 475,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__JAFGBC01;g__JAFGAV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Aminicenantia",
        "o__Aminicenantales",
        "f__RBG-16-66-30",
        "g__RBG-16-66-30",
        "s__RBG-16-66-30 sp011048485"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Aminicenantes",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Aminicenantia",
        "o__Aminicenantales",
        "f__RBG-16-66-30",
        "g__RBG-16-66-30",
        "s__RBG-16-66-30 sp011048485",
        "Bacteria",
        "Acidobacteriota",
        "Aminicenantia",
        "Aminicenantales",
        "RBG-16-66-30",
        "RBG-16-66-30",
        "RBG-16-66-30",
        "sp011048485"
    ],
    "_meo": [
        {
            "id": "MEO_0000686",
            "label": "hydrothermal sediment"
        },
        {
            "id": "MEO_0000029",
            "label": "hot spring"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}