{ "type": "genome", "identifier": "GCA_011322495.1", "organism": "Aliiroseovarius sp.", "title": "Aliiroseovarius sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "The University of Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_011322495.1", "bioproject": "PRJNA480137", "biosample": "SAMN09638699", "wgs_master": "DRMT00000000.1", "refseq_category": "na", "taxid": "1872442", "species_taxid": "1872442", "organism_name": "Aliiroseovarius sp.", "infraspecific_name": "", "isolate": "HyVt-494", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/16", "asm_name": "ASM1132249v1", "submitter": "The University of Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/322/495/GCA_011322495.1_ASM1132249v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-16", "dateModified": "2020-03-16", "datePublished": "2020-03-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Aliiroseovarius sp." ], "sample_taxid": [ "1872442" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Tonga: Lau Basin" ], "sample_host_location_id": [], "data_size": "0.793 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 70.6, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2853698", "Number of Sequences": "642", "Longest Sequences (bp)": "27906", "N50 (bp)": "5303", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.4", "Number of CDSs": "2262", "Average Protein Length": "289.4", "Coding Ratio (%)": "68.8", "Number of rRNAs": "0", "Number of tRNAs": "30", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Cribrihabitans marinus", "strain": "strain=DSM 29340", "accession": "GCA_900109035.1", "taxid": 1227549, "species_taxid": 1227549, "relation_to_type": "type", "validated": true, "ani": 78.0199, "matched_fragments": 255, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cribrihabitans marinus", "strain": "strain=CGMCC 1.13219", "accession": "GCA_014640375.1", "taxid": 1227549, "species_taxid": 1227549, "relation_to_type": "type", "validated": true, "ani": 78.0011, "matched_fragments": 259, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, 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"total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ruegeria marina", "strain": "strain=CGMCC 1.9108", "accession": "GCA_900101475.1", "taxid": 639004, "species_taxid": 639004, "relation_to_type": "type", "validated": true, "ani": 77.6304, "matched_fragments": 203, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mangrovicoccus algicola", "strain": "strain=HB182678", "accession": "GCA_014903745.1", "taxid": 2771008, "species_taxid": 2771008, "relation_to_type": "type", "validated": true, "ani": 77.5812, "matched_fragments": 170, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibacterium elongatum", "strain": "strain=DFL-43", "accession": "GCA_000590925.1", "taxid": 159346, "species_taxid": 159346, "relation_to_type": "type", "validated": true, "ani": 77.3379, "matched_fragments": 182, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter harenae", "strain": "strain=DP07", "accession": "GCA_009882975.1", "taxid": 2606218, "species_taxid": 2606218, "relation_to_type": "type", "validated": true, "ani": 77.3298, "matched_fragments": 187, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Meinhardsimonia xiamenensis", "strain": "strain=DSM 24422", "accession": "GCA_003001835.1", "taxid": 990712, "species_taxid": 990712, "relation_to_type": "type", "validated": true, "ani": 77.3204, "matched_fragments": 188, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lutimaribacter saemankumensis", "strain": "strain=DSM 28010", "accession": "GCA_900100005.1", "taxid": 490829, "species_taxid": 490829, "relation_to_type": "type", "validated": true, "ani": 77.2888, "matched_fragments": 185, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter alexandrii", "strain": "strain=LZ-17", "accession": "GCA_005871115.1", "taxid": 2570355, "species_taxid": 2570355, "relation_to_type": "type", "validated": true, "ani": 77.2853, "matched_fragments": 171, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Meinhardsimonia xiamenensis", "strain": "strain=CGMCC 1.10789", "accession": "GCA_900102905.1", "taxid": 990712, "species_taxid": 990712, "relation_to_type": "type", "validated": true, "ani": 77.2406, "matched_fragments": 189, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter alkaliphilus", "strain": "strain=HTCC2654", "accession": "GCA_000152805.1", "taxid": 404236, "species_taxid": 404236, "relation_to_type": "type", "validated": true, "ani": 77.2219, "matched_fragments": 172, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter ovatus", "strain": "strain=JA234", "accession": "GCA_900207575.1", "taxid": 439529, "species_taxid": 439529, "relation_to_type": "type", "validated": true, "ani": 77.2054, "matched_fragments": 182, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter sphaeroides", "strain": "strain=2.4.1", "accession": "GCA_000273405.1", "taxid": 1063, "species_taxid": 1063, "relation_to_type": "type", "validated": true, "ani": 77.0278, "matched_fragments": 166, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alexandriicola marinus", "strain": "strain=LZ-14", "accession": "GCA_004000435.1", "taxid": 2081710, "species_taxid": 2081710, "relation_to_type": "type", "validated": true, "ani": 76.9377, "matched_fragments": 156, "total_fragments": 610, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salipiger pallidus", "strain": "strain=CGMCC 1.15762", "accession": "GCA_014643635.1", "taxid": 1775170, 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