{
    "type": "genome",
    "identifier": "GCA_011372625.1",
    "organism": "Campylobacterales bacterium",
    "title": "Campylobacterales bacterium",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Hong Kong",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_011372625.1",
        "bioproject": "PRJNA480137",
        "biosample": "SAMN09638846",
        "wgs_master": "DRSI00000000.1",
        "refseq_category": "na",
        "taxid": "2268180",
        "species_taxid": "2268180",
        "organism_name": "Campylobacterales bacterium",
        "infraspecific_name": "",
        "isolate": "HyVt-626",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/16",
        "asm_name": "ASM1137262v1",
        "submitter": "The University of Hong Kong",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/372/625/GCA_011372625.1_ASM1137262v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-16",
    "dateModified": "2020-03-16",
    "datePublished": "2020-03-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Campylobacterales bacterium"
        ],
        "sample_taxid": [
            "2268180"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Taiwan"
        ],
        "sample_host_location_id": [],
        "data_size": "0.381 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 50.85,
        "contamination": 0.46,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1353975",
        "Number of Sequences": "588",
        "Longest Sequences (bp)": "7568",
        "N50 (bp)": "2293",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.3",
        "Number of CDSs": "931",
        "Average Protein Length": "239.6",
        "Coding Ratio (%)": "49.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 50.85,
            "contamination": 0.46,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013153055.1",
                "gtdb_species": "s__UBA1140 sp013153055",
                "ani": 80.8431,
                "matched_fragments": 50,
                "total_fragments": 100,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__UBA1140",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": 0.259,
        "doubling_h": 0.335,
        "growth_tmp": 35.128,
        "optimum_tmp": 33.644,
        "optimum_ph": 6.803,
        "genome_size": 2102520.983,
        "gc_content": 35.015,
        "coding_genes": 2000.919,
        "rRNA16S_genes": 2.702,
        "tRNA_genes": 43.881,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.89,
        "range_salinity": 0.5,
        "facultative_respiration": 0.033,
        "anaerobic_respiration": 0.112,
        "aerobic_respiration": 0.853,
        "mesophilic_range_tmp": 0.968,
        "thermophilic_range_tmp": 0.031,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.368,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.017,
        "vibrio_cell_shape": 0.087,
        "spiral_cell_shape": 0.526
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp024763575"
    ],
    "_genome_taxon": [
        "Campylobacterales",
        "bacterium",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__UBA1140",
        "s__UBA1140 sp024763575",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurovaceae",
        "UBA1140",
        "UBA1140",
        "sp024763575"
    ],
    "_meo": [
        {
            "id": "MEO_0000686",
            "label": "hydrothermal sediment"
        },
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}