{ "type": "genome", "identifier": "GCA_011620425.1", "organism": "Desulfuromonadales bacterium", "title": "Desulfuromonadales bacterium", "description": "derived from metagenome; fragmented assembly; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "publication": [ {} ], "properties": { "assembly_accession": "GCA_011620425.1", "bioproject": "PRJNA592873", "biosample": "SAMN13475814", "wgs_master": "WOZF00000000.1", "refseq_category": "na", "taxid": "2099678", "species_taxid": "2099678", "organism_name": "Desulfuromonadales bacterium", "infraspecific_name": "", "isolate": "WOFB17", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/23", "asm_name": "ASM1162042v1", "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/620/425/GCA_011620425.1_ASM1162042v1", "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-23", "dateModified": "2020-03-23", "datePublished": "2020-03-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfuromonadales bacterium" ], "sample_taxid": [ "2099678" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany: Wietze" ], "sample_host_location_id": [], "data_size": "0.575 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 67.19, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2025323", "Number of Sequences": "425", "Longest Sequences (bp)": "13749", "N50 (bp)": "4980", "Gap Ratio (%)": "0.032094", "GCcontent (%)": "63.8", "Number of CDSs": "1553", "Average Protein Length": "290.1", "Coding Ratio (%)": "66.7", "Number of rRNAs": "0", "Number of tRNAs": "21", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfuromonas versatilis", "strain": "strain=NIT-T3", "accession": "GCA_019704135.1", "taxid": 2802975, "species_taxid": 2802975, "relation_to_type": "type", "validated": true, "ani": 79.085, "matched_fragments": 185, "total_fragments": 455, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfuromonas soudanensis", "strain": "strain=WTL", "accession": "GCA_001278055.1", "taxid": 1603606, "species_taxid": 1603606, "relation_to_type": "type", "validated": true, "ani": 78.9981, "matched_fragments": 174, 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{ "organism_name": "Geothermobacter hydrogeniphilus", "strain": "strain=EPR-M", "accession": "GCA_002093115.1", "taxid": 1969733, "species_taxid": 1969733, "relation_to_type": "type", "validated": true, "ani": 77.8985, "matched_fragments": 128, "total_fragments": 455, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geoalkalibacter subterraneus", "strain": "strain=Red1", "accession": "GCA_000827125.1", "taxid": 483547, "species_taxid": 483547, "relation_to_type": "type", "validated": true, "ani": 77.3054, "matched_fragments": 69, "total_fragments": 455, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Syntrophotalea acetylenica", "strain": "strain=DSM 3246", "accession": "GCA_001888165.1", "taxid": 29542, "species_taxid": 29542, "relation_to_type": "type", "validated": true, "ani": 77.2958, "matched_fragments": 52, "total_fragments": 455, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Geoalkalibacter halelectricus", 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