{
    "type": "genome",
    "identifier": "GCA_011620595.1",
    "organism": "Bacteroidales bacterium",
    "title": "Bacteroidales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_011620595.1",
        "bioproject": "PRJNA592873",
        "biosample": "SAMN13475806",
        "wgs_master": "WOYX00000000.1",
        "refseq_category": "na",
        "taxid": "2030927",
        "species_taxid": "2030927",
        "organism_name": "Bacteroidales bacterium",
        "infraspecific_name": "",
        "isolate": "WOFB09",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/23",
        "asm_name": "ASM1162059v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/620/595/GCA_011620595.1_ASM1162059v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-23",
    "dateModified": "2020-03-23",
    "datePublished": "2020-03-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidales bacterium"
        ],
        "sample_taxid": [
            "2030927"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Wietze"
        ],
        "sample_host_location_id": [],
        "data_size": "0.882 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3081122",
        "Number of Sequences": "63",
        "Longest Sequences (bp)": "143632",
        "N50 (bp)": "88282",
        "Gap Ratio (%)": "0.178506",
        "GCcontent (%)": "50.8",
        "Number of CDSs": "2489",
        "Average Protein Length": "367.1",
        "Coding Ratio (%)": "89.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_011620595.1",
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                "matched_fragments": 993,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002403305.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
                "min_intra_species_ani": "99.90",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_002383485.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002402965.1",
                "gtdb_species": "s__SR-FBR-E99 sp002402965",
                "ani": 78.4553,
                "matched_fragments": 367,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012513795.1",
                "gtdb_species": "s__SR-FBR-E99 sp012513795",
                "ani": 78.3307,
                "matched_fragments": 288,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002325785.1",
                "gtdb_species": "s__SR-FBR-E99 sp002325785",
                "ani": 78.2003,
                "matched_fragments": 332,
                "total_fragments": 997,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018262715.1",
                "gtdb_species": "s__SR-FBR-E99 sp018262715",
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                "matched_fragments": 328,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.48",
                "min_intra_species_ani": "99.48",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002409145.1",
                "gtdb_species": "s__SR-FBR-E99 sp002409145",
                "ani": 77.68,
                "matched_fragments": 282,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_006227095.1",
                "gtdb_species": "s__SR-FBR-E99 sp006227095",
                "ani": 77.4996,
                "matched_fragments": 186,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009881065.1",
                "gtdb_species": "s__SR-FBR-E99 sp009881065",
                "ani": 77.4758,
                "matched_fragments": 238,
                "total_fragments": 997,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.27",
                "min_intra_species_ani": "99.14",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_003250475.1",
                "gtdb_species": "s__SR-FBR-E99 sp003250475",
                "ani": 77.458,
                "matched_fragments": 307,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__VadinHA17;g__SR-FBR-E99",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.217,
        "cell_length": 0.157,
        "doubling_h": 0.206,
        "growth_tmp": 36.585,
        "optimum_tmp": 36.041,
        "optimum_ph": 7.086,
        "genome_size": 3658719.825,
        "gc_content": 44.947,
        "coding_genes": 3043.648,
        "rRNA16S_genes": 4.032,
        "tRNA_genes": 57.661,
        "gram_stain": 0.014,
        "sporulation": 0.0,
        "motility": 0.04,
        "range_salinity": 0.0,
        "facultative_respiration": 0.006,
        "anaerobic_respiration": 0.958,
        "aerobic_respiration": 0.034,
        "mesophilic_range_tmp": 0.985,
        "thermophilic_range_tmp": 0.014,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.95,
        "coccus_cell_shape": 0.024,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.024,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__VadinHA17",
        "g__SR-FBR-E99",
        "s__SR-FBR-E99 sp011620595"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__VadinHA17",
        "g__SR-FBR-E99",
        "s__SR-FBR-E99 sp011620595",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "VadinHA17",
        "SR-FBR-E99",
        "SR-FBR-E99",
        "sp011620595"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        },
        {
            "id": "MEO_0001474",
            "label": "oil associated feature"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}