{
    "type": "genome",
    "identifier": "GCA_011620685.1",
    "organism": "Proteiniphilum sp.",
    "title": "Proteiniphilum sp.",
    "description": "derived from metagenome; fragmented assembly",
    "data type": "Genome sequencing and assembly",
    "organization": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_011620685.1",
        "bioproject": "PRJNA592873",
        "biosample": "SAMN13475803",
        "wgs_master": "WOYU00000000.1",
        "refseq_category": "na",
        "taxid": "1926877",
        "species_taxid": "1926877",
        "organism_name": "Proteiniphilum sp.",
        "infraspecific_name": "",
        "isolate": "WOFB06",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/23",
        "asm_name": "ASM1162068v1",
        "submitter": "Genomic and Applied Microbiology & Goettingen Genomics Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/011/620/685/GCA_011620685.1_ASM1162068v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-23",
    "dateModified": "2020-03-23",
    "datePublished": "2020-03-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Proteiniphilum sp."
        ],
        "sample_taxid": [
            "1926877"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Wietze"
        ],
        "sample_host_location_id": [],
        "data_size": "0.405 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.85,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1395953",
        "Number of Sequences": "258",
        "Longest Sequences (bp)": "26085",
        "N50 (bp)": "5965",
        "Gap Ratio (%)": "0.459185",
        "GCcontent (%)": "46.7",
        "Number of CDSs": "895",
        "Average Protein Length": "359.5",
        "Coding Ratio (%)": "69.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "13",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Proteiniphilum acetatigenes",
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                "accession": "GCA_000380985.1",
                "taxid": 294710,
                "species_taxid": 294710,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 103,
                "total_fragments": 338,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Proteiniphilum saccharofermentans",
                "strain": "strain=M3/6",
                "accession": "GCA_900095135.1",
                "taxid": 1642647,
                "species_taxid": 1642647,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1793,
                "matched_fragments": 100,
                "total_fragments": 338,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 58.85,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "gtdb_species": "s__Proteiniphilum sp002408485",
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                "matched_fragments": 213,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.68",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.77",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_018433945.1",
                "gtdb_species": "s__Proteiniphilum sp018433945",
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                "matched_fragments": 135,
                "total_fragments": 338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002383605.1",
                "gtdb_species": "s__Proteiniphilum sp002383605",
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                "matched_fragments": 197,
                "total_fragments": 338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.07",
                "min_intra_species_ani": "99.07",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_001768325.1",
                "gtdb_species": "s__Proteiniphilum sp001768325",
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                "matched_fragments": 206,
                "total_fragments": 338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.21",
                "min_intra_species_ani": "95.58",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002398565.1",
                "gtdb_species": "s__Proteiniphilum sp002398565",
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                "matched_fragments": 194,
                "total_fragments": 338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.17",
                "min_intra_species_ani": "99.05",
                "mean_intra_species_af": "0.83",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_016649795.1",
                "gtdb_species": "s__Proteiniphilum sp016649795",
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                "total_fragments": 338,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002411515.1",
                "gtdb_species": "s__Proteiniphilum sp002411515",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_012727735.1",
                "gtdb_species": "s__Proteiniphilum sp012727735",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_015478855.1",
                "gtdb_species": "s__Proteiniphilum sp015478855",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_900095135.1",
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            },
            {
                "accession": "GCA_002410345.1",
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            },
            {
                "accession": "GCA_002305715.1",
                "gtdb_species": "s__Proteiniphilum sp002305715",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": -0.171,
        "cell_length": 0.295,
        "doubling_h": null,
        "growth_tmp": 37.0,
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        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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    "_genome_taxon": [
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        "p__Bacteroidota",
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        "f__Dysgonomonadaceae",
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        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Dysgonomonadaceae",
        "Proteiniphilum",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        },
        {
            "id": "MEO_0001474",
            "label": "oil associated feature"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}