{
    "type": "genome",
    "identifier": "GCA_013002355.1",
    "organism": "Pricia sp.",
    "title": "Pricia sp.",
    "description": "derived from metagenome; fragmented assembly",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013002355.1",
        "bioproject": "PRJNA609151",
        "biosample": "SAMN14260500",
        "wgs_master": "JABDKB000000000.1",
        "refseq_category": "na",
        "taxid": "2268138",
        "species_taxid": "2268138",
        "organism_name": "Pricia sp.",
        "infraspecific_name": "",
        "isolate": "SS_bin_38",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/09",
        "asm_name": "ASM1300235v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/002/355/GCA_013002355.1_ASM1300235v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-09",
    "dateModified": "2020-05-09",
    "datePublished": "2020-05-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pricia sp."
        ],
        "sample_taxid": [
            "2268138"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Middle Park Beach, Port Phillip Bay"
        ],
        "sample_host_location_id": [],
        "data_size": "0.875 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 63.19,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3003330",
        "Number of Sequences": "1091",
        "Longest Sequences (bp)": "13898",
        "N50 (bp)": "3055",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.4",
        "Number of CDSs": "1722",
        "Average Protein Length": "273.6",
        "Coding Ratio (%)": "47.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "14",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Pareuzebyella sediminis",
                "strain": "strain=S2-4-21",
                "accession": "GCA_008367235.1",
                "taxid": 2607998,
                "species_taxid": 2607998,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.136,
                "matched_fragments": 100,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Zobellia uliginosa",
                "strain": "strain=DSM 2061",
                "accession": "GCA_900156625.1",
                "taxid": 143224,
                "species_taxid": 143224,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6066,
                "matched_fragments": 81,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Zobellia galactanivorans",
                "strain": "strain=DsiJT",
                "accession": "GCA_000973105.1",
                "taxid": 63186,
                "species_taxid": 63186,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4622,
                "matched_fragments": 79,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Zobellia roscoffensis",
                "strain": "strain=Asnod1-F08",
                "accession": "GCA_015330165.1",
                "taxid": 2779508,
                "species_taxid": 2779508,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.2678,
                "matched_fragments": 63,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Zobellia russellii",
                "strain": "strain=KMM 3677",
                "accession": "GCA_018728565.1",
                "taxid": 248907,
                "species_taxid": 248907,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1371,
                "matched_fragments": 64,
                "total_fragments": 399,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 63.19,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_008367235.1",
                "gtdb_species": "s__Pareuzebyella sediminis",
                "ani": 78.136,
                "matched_fragments": 100,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Pareuzebyella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.39",
                "min_intra_species_ani": "99.39",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_900156625.1",
                "gtdb_species": "s__Zobellia uliginosa",
                "ani": 77.6066,
                "matched_fragments": 81,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000973105.1",
                "gtdb_species": "s__Zobellia galactanivorans",
                "ani": 77.4622,
                "matched_fragments": 79,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.09",
                "min_intra_species_ani": "99.05",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_015330165.1",
                "gtdb_species": "s__Zobellia sp015330165",
                "ani": 77.2678,
                "matched_fragments": 63,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.41",
                "min_intra_species_ani": "98.41",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_018728565.1",
                "gtdb_species": "s__Zobellia russellii",
                "ani": 77.1371,
                "matched_fragments": 64,
                "total_fragments": 399,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Zobellia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.51",
                "min_intra_species_ani": "97.51",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.222,
        "cell_length": -0.125,
        "doubling_h": null,
        "growth_tmp": 20.0,
        "optimum_tmp": 18.0,
        "optimum_ph": 7.75,
        "genome_size": 4851997.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Pareuzebyella",
        "s__"
    ],
    "_genome_taxon": [
        "Pricia",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Pareuzebyella",
        "s__",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "Pareuzebyella",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000192",
            "label": "beach sand"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}