{
    "type": "genome",
    "identifier": "GCA_013042475.1",
    "organism": "Desulfofustis sp.",
    "title": "Desulfofustis sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013042475.1",
        "bioproject": "PRJNA623061",
        "biosample": "SAMN14538064",
        "wgs_master": "JABDQA000000000.1",
        "refseq_category": "na",
        "taxid": "2053546",
        "species_taxid": "2053546",
        "organism_name": "Desulfofustis sp.",
        "infraspecific_name": "",
        "isolate": "Site_B28",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/11",
        "asm_name": "ASM1304247v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/042/475/GCA_013042475.1_ASM1304247v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-11",
    "dateModified": "2020-05-11",
    "datePublished": "2020-05-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Desulfofustis sp."
        ],
        "sample_taxid": [
            "2053546"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Middle Park Beach, Port Phillip Bay site B"
        ],
        "sample_host_location_id": [],
        "data_size": "1.012 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3512614",
        "Number of Sequences": "237",
        "Longest Sequences (bp)": "63054",
        "N50 (bp)": "22709",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "51.9",
        "Number of CDSs": "3042",
        "Average Protein Length": "316.1",
        "Coding Ratio (%)": "82.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "36",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Desulfoprunum benzoelyticum",
                "strain": "strain=DSM 28570",
                "accession": "GCA_016918515.1",
                "taxid": 1506996,
                "species_taxid": 1506996,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7032,
                "matched_fragments": 79,
                "total_fragments": 1059,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfoprunum benzoelyticum",
                "strain": "strain=DSM 28570",
                "accession": "GCA_014201505.1",
                "taxid": 1506996,
                "species_taxid": 1506996,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.6686,
                "matched_fragments": 80,
                "total_fragments": 1059,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Desulfogranum mediterraneum",
                "strain": "strain=DSM 13871",
                "accession": "GCA_000429965.1",
                "taxid": 160661,
                "species_taxid": 160661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0269,
                "matched_fragments": 57,
                "total_fragments": 1059,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013042475.1",
                "gtdb_species": "s__JABDQA01 sp013042475",
                "ani": 100.0,
                "matched_fragments": 1046,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__JABDQA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.26",
                "min_intra_species_ani": "99.07",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905479735.1",
                "gtdb_species": "s__JABDQA01 sp905479735",
                "ani": 78.9055,
                "matched_fragments": 440,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__JABDQA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016722945.1",
                "gtdb_species": "s__PB-SRB1 sp003500125",
                "ani": 76.7479,
                "matched_fragments": 122,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__PB-SRB1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_015484845.1",
                "gtdb_species": "s__DRKI01 sp015484845",
                "ani": 76.6767,
                "matched_fragments": 51,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__DRKI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014201505.1",
                "gtdb_species": "s__Desulfoprunum benzoelyticum",
                "ani": 76.6421,
                "matched_fragments": 81,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__Desulfoprunum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_000769715.1",
                "gtdb_species": "s__Desulfoprunum sp000769715",
                "ani": 76.1629,
                "matched_fragments": 64,
                "total_fragments": 1059,
                "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__Desulfoprunum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.79",
                "min_intra_species_ani": "99.74",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 5,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.26,
        "cell_length": 0.301,
        "doubling_h": null,
        "growth_tmp": 27.0,
        "optimum_tmp": 28.0,
        "optimum_ph": null,
        "genome_size": 4977298.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfobulbia",
        "o__Desulfobulbales",
        "f__Desulfocapsaceae",
        "g__JABDQA01",
        "s__JABDQA01 sp013042475"
    ],
    "_genome_taxon": [
        "Desulfofustis",
        "sp.",
        "d__Bacteria",
        "p__Desulfobacterota",
        "c__Desulfobulbia",
        "o__Desulfobulbales",
        "f__Desulfocapsaceae",
        "g__JABDQA01",
        "s__JABDQA01 sp013042475",
        "Bacteria",
        "Desulfobacterota",
        "Desulfobulbia",
        "Desulfobulbales",
        "Desulfocapsaceae",
        "JABDQA01",
        "JABDQA01",
        "sp013042475"
    ],
    "_meo": [
        {
            "id": "MEO_0000192",
            "label": "beach sand"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}