{
    "type": "genome",
    "identifier": "GCA_013112725.1",
    "organism": "Chloroflexota bacterium",
    "title": "Chloroflexota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "KAUST",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013112725.1",
        "bioproject": "PRJNA592266",
        "biosample": "SAMN13420029",
        "wgs_master": "JABFFZ000000000.1",
        "refseq_category": "na",
        "taxid": "2026724",
        "species_taxid": "2026724",
        "organism_name": "Chloroflexota bacterium",
        "infraspecific_name": "",
        "isolate": "CFX8",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/17",
        "asm_name": "ASM1311272v1",
        "submitter": "KAUST",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/112/725/GCA_013112725.1_ASM1311272v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-17",
    "dateModified": "2020-05-17",
    "datePublished": "2020-05-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chloroflexota bacterium"
        ],
        "sample_taxid": [
            "2026724"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Saudi Arabia: KAUST"
        ],
        "sample_host_location_id": [],
        "data_size": "1.560 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5511085",
        "Number of Sequences": "158",
        "Longest Sequences (bp)": "203874",
        "N50 (bp)": "53736",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.1",
        "Number of CDSs": "4825",
        "Average Protein Length": "330.7",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "3",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013112725.1",
                "gtdb_species": "s__CAADGU01 sp013112725",
                "ani": 100.0,
                "matched_fragments": 1746,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__CAADGU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900696625.1",
                "gtdb_species": "s__CAADGU01 sp900696625",
                "ani": 92.5817,
                "matched_fragments": 1279,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__CAADGU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014584575.1",
                "gtdb_species": "s__CAADGU01 sp014584575",
                "ani": 84.7586,
                "matched_fragments": 1366,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__CAADGU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011525915.1",
                "gtdb_species": "s__CAADGU01 sp011525915",
                "ani": 77.1968,
                "matched_fragments": 512,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__CAADGU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016716065.1",
                "gtdb_species": "s__JADJXA01 sp016716065",
                "ani": 76.5796,
                "matched_fragments": 288,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__JADJXA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016710325.1",
                "gtdb_species": "s__GCA-2699125 sp016710325",
                "ani": 76.4598,
                "matched_fragments": 294,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__GCA-2699125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016705235.1",
                "gtdb_species": "s__JADJXA01 sp016705235",
                "ani": 76.3121,
                "matched_fragments": 260,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__JADJXA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.13",
                "min_intra_species_ani": "98.95",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_017993775.1",
                "gtdb_species": "s__JADJXA01 sp017993775",
                "ani": 76.2954,
                "matched_fragments": 244,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__JADJXA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.90",
                "min_intra_species_ani": "99.90",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002699125.1",
                "gtdb_species": "s__GCA-2699125 sp002699125",
                "ani": 76.232,
                "matched_fragments": 266,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__GCA-2699125",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016707605.1",
                "gtdb_species": "s__Promineofilum sp016707605",
                "ani": 75.8125,
                "matched_fragments": 130,
                "total_fragments": 1757,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__Promineofilum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Promineifilales",
        "f__Promineifilaceae",
        "g__CAADGU01",
        "s__CAADGU01 sp013112725"
    ],
    "_genome_taxon": [
        "Chloroflexota",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Promineifilales",
        "f__Promineifilaceae",
        "g__CAADGU01",
        "s__CAADGU01 sp013112725",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Promineifilales",
        "Promineifilaceae",
        "CAADGU01",
        "CAADGU01",
        "sp013112725"
    ],
    "_meo": [
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}