{
    "type": "genome",
    "identifier": "GCA_013139635.1",
    "organism": "Paracoccaceae bacterium",
    "title": "Paracoccaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "GNS Science",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013139635.1",
        "bioproject": "PRJNA562730",
        "biosample": "SAMN13287941",
        "wgs_master": "WTAL00000000.1",
        "refseq_category": "na",
        "taxid": "1904441",
        "species_taxid": "1904441",
        "organism_name": "Paracoccaceae bacterium",
        "infraspecific_name": "",
        "isolate": "GLR160",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/21",
        "asm_name": "ASM1313963v1",
        "submitter": "GNS Science",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/139/635/GCA_013139635.1_ASM1313963v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-21",
    "dateModified": "2020-05-21",
    "datePublished": "2020-05-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Paracoccaceae bacterium"
        ],
        "sample_taxid": [
            "1904441"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "New Zealand: Hikurangi Margin"
        ],
        "sample_host_location_id": [],
        "data_size": "0.976 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 2.08,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3421644",
        "Number of Sequences": "271",
        "Longest Sequences (bp)": "58851",
        "N50 (bp)": "17347",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.0",
        "Number of CDSs": "3311",
        "Average Protein Length": "286.5",
        "Coding Ratio (%)": "83.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Actibacterium lipolyticum",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Pseudophaeobacter arcticus",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Thalassobius mangrovi",
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                "species_taxid": 2692236,
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliiroseovarius crassostreae",
                "strain": "strain=CV919-312",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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                "accession": "GCA_000647975.1",
                "taxid": 1087332,
                "species_taxid": 1087332,
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                "matched_fragments": 60,
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                "status": "below_threshold"
            },
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                "organism_name": "Tabrizicola sediminis",
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                "accession": "GCA_004745575.1",
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                "species_taxid": 2486418,
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                "ani": 75.714,
                "matched_fragments": 55,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aliiroseovarius crassostreae",
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                "accession": "GCA_900116725.1",
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                "relation_to_type": "type",
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                "ani": 75.7089,
                "matched_fragments": 57,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseovarius faecimaris",
                "strain": "strain=MME-070",
                "accession": "GCA_009762325.1",
                "taxid": 2494550,
                "species_taxid": 2494550,
                "relation_to_type": "type",
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum adriaticum",
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                "accession": "GCA_016583705.1",
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                "species_taxid": 35804,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovulum adriaticum",
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                "validated": true,
                "ani": 75.2413,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCA_016765235.1",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
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        "doubling_h": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "vibrio_cell_shape": null,
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    },
    "_gtdb_taxon": [
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        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
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    "_genome_taxon": [
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        "Rhodobacterales",
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        "UBA3077",
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        "sp013139635"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        },
        {
            "id": "MEO_0001170",
            "label": "cold seep"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}