{
    "type": "genome",
    "identifier": "GCA_013153375.1",
    "organism": "Chloroflexota bacterium",
    "title": "Chloroflexota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Lab of Microbial Oceanography",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013153375.1",
        "bioproject": "PRJNA557557",
        "biosample": "SAMN12405689",
        "wgs_master": "JAADEN000000000.1",
        "refseq_category": "na",
        "taxid": "2026724",
        "species_taxid": "2026724",
        "organism_name": "Chloroflexota bacterium",
        "infraspecific_name": "",
        "isolate": "L_MetaBat.219",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/22",
        "asm_name": "ASM1315337v1",
        "submitter": "Lab of Microbial Oceanography",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/153/375/GCA_013153375.1_ASM1315337v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-22",
    "dateModified": "2020-05-22",
    "datePublished": "2020-05-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chloroflexota bacterium"
        ],
        "sample_taxid": [
            "2026724"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: East Pacific Rise"
        ],
        "sample_host_location_id": [],
        "data_size": "0.471 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1717728",
        "Number of Sequences": "240",
        "Longest Sequences (bp)": "26100",
        "N50 (bp)": "8458",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.0",
        "Number of CDSs": "1353",
        "Average Protein Length": "329.7",
        "Coding Ratio (%)": "77.9",
        "Number of rRNAs": "1",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Thermaerobacter marianensis",
                "strain": "strain=DSM 12885",
                "accession": "GCA_000184705.1",
                "taxid": 73919,
                "species_taxid": 73919,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7659,
                "matched_fragments": 52,
                "total_fragments": 468,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Litorilinea aerophila",
                "strain": "strain=ATCC BAA-2444",
                "accession": "GCA_006569185.2",
                "taxid": 1204385,
                "species_taxid": 1204385,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5122,
                "matched_fragments": 66,
                "total_fragments": 468,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Streptomyces radicis",
                "strain": "strain=DS1-2",
                "accession": "GCA_003626575.1",
                "taxid": 1750517,
                "species_taxid": 1750517,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8785,
                "matched_fragments": 56,
                "total_fragments": 468,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013153375.1",
                "gtdb_species": "s__JAADEN01 sp013153375",
                "ani": 100.0,
                "matched_fragments": 459,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__JAADEN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_015494815.1",
                "gtdb_species": "s__JAADEN01 sp015494815",
                "ani": 83.7631,
                "matched_fragments": 326,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__JAADEN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013153335.1",
                "gtdb_species": "s__JAADEN01 sp013153335",
                "ani": 77.6206,
                "matched_fragments": 109,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__JAADEN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015491595.1",
                "gtdb_species": "s__S139-71 sp015491595",
                "ani": 77.4372,
                "matched_fragments": 110,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__S139-71",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013153135.1",
                "gtdb_species": "s__JAADEN01 sp013153135",
                "ani": 77.3112,
                "matched_fragments": 99,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__JAADEN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011176535.1",
                "gtdb_species": "s__DUEP01 sp011176535",
                "ani": 77.0312,
                "matched_fragments": 121,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__DUEP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.79",
                "min_intra_species_ani": "99.71",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_013154225.1",
                "gtdb_species": "s__DRMV01 sp013154225",
                "ani": 76.2366,
                "matched_fragments": 54,
                "total_fragments": 468,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__DRMV01;g__DRMV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__DRMV01",
        "g__JAADEN01",
        "s__JAADEN01 sp013153375"
    ],
    "_genome_taxon": [
        "Chloroflexota",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__DRMV01",
        "g__JAADEN01",
        "s__JAADEN01 sp013153375",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Anaerolineales",
        "DRMV01",
        "JAADEN01",
        "JAADEN01",
        "sp013153375"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}