{ "type": "genome", "identifier": "GCA_013213975.1", "organism": "Winogradskyella sp.", "title": "Winogradskyella sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Simons Collaboration on Ocean Processes and Ecology (SCOPE)", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013213975.1", "bioproject": "PRJNA482655", "biosample": "SAMN14675807", "wgs_master": "JABSST000000000.1", "refseq_category": "na", "taxid": "1883156", "species_taxid": "1883156", "organism_name": "Winogradskyella sp.", "infraspecific_name": "", "isolate": "DT_119", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/02", "asm_name": "ASM1321397v1", "submitter": "Simons Collaboration on Ocean Processes and Ecology (SCOPE)", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/213/975/GCA_013213975.1_ASM1321397v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-02", "dateModified": "2020-06-02", "datePublished": "2020-06-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Winogradskyella sp." ], "sample_taxid": [ "1883156" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: North Pacific Gyre, Station ALOHA" ], "sample_host_location_id": [], "data_size": "0.889 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella tangerina", "strain": "strain=M1309", "accession": "GCA_003260205.1", "taxid": 2023240, "species_taxid": 2023240, "relation_to_type": "type", "validated": true, "ani": 78.2833, "matched_fragments": 350, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014284085.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", "validated": true, "ani": 78.2765, "matched_fragments": 356, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014297365.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", "validated": true, "ani": 78.2765, "matched_fragments": 356, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" 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"strain": "strain=F6397", "accession": "GCA_015645385.1", "taxid": 2785530, "species_taxid": 2785530, "relation_to_type": "type", "validated": true, "ani": 77.8489, "matched_fragments": 271, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella litoriviva", "strain": "strain=KMM6491", "accession": "GCA_013249065.1", "taxid": 1220182, "species_taxid": 1220182, "relation_to_type": "type", "validated": true, "ani": 77.815, "matched_fragments": 276, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella vidalii", "strain": "strain=HL634", "accession": "GCA_013403955.1", "taxid": 2615024, "species_taxid": 2615024, "relation_to_type": "type", "validated": true, "ani": 77.8042, "matched_fragments": 242, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella sediminis", "strain": "strain=DSM 28134", "accession": "GCA_003387355.1", "taxid": 1382466, "species_taxid": 1382466, "relation_to_type": "type", "validated": true, "ani": 77.7662, "matched_fragments": 277, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella schleiferi", "strain": "strain=Z215", "accession": "GCA_013394655.1", "taxid": 2686078, "species_taxid": 2686078, "relation_to_type": "type", "validated": true, "ani": 77.7484, "matched_fragments": 264, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella endarachnes", "strain": "strain=HL2-2", "accession": "GCA_009741275.1", "taxid": 2681965, "species_taxid": 2681965, "relation_to_type": "type", "validated": true, "ani": 77.7271, "matched_fragments": 295, "total_fragments": 959, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella jejuensis", "strain": "strain=DSM 25330", "accession": "GCA_900129745.1", "taxid": 1089305, 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