{ "type": "genome", "identifier": "GCA_013316335.1", "organism": "Clostridia bacterium", "title": "Clostridia bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "University of Vienna", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013316335.1", "bioproject": "PRJNA586865", "biosample": "SAMN13256047", "wgs_master": "WSMW00000000.1", "refseq_category": "na", "taxid": "2044939", "species_taxid": "2044939", "organism_name": "Clostridia bacterium", "infraspecific_name": "", "isolate": "RACS_034", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/10", "asm_name": "ASM1331633v1", "submitter": "University of Vienna", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/316/335/GCA_013316335.1_ASM1331633v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-10", "dateModified": "2020-06-10", "datePublished": "2020-06-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Clostridia bacterium" ], "sample_taxid": [ "2044939" ], "sample_host_organism": [ "Mus musculus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "0.238 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 62.31, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "829992", "Number of Sequences": "157", "Longest Sequences (bp)": "30670", "N50 (bp)": 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"d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__Borkfalkiaceae;g__Coproplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_910578145.1", "gtdb_species": "s__Coproplasma sp910578145", "ani": 77.4368, "matched_fragments": 61, "total_fragments": 188, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Christensenellales;f__Borkfalkiaceae;g__Coproplasma", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, "growth_tmp": null, "optimum_tmp": null, "optimum_ph": null, "genome_size": null, "gc_content": null, 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