{
    "type": "genome",
    "identifier": "GCA_013316545.1",
    "organism": "Muribaculaceae bacterium",
    "title": "Muribaculaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Vienna",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013316545.1",
        "bioproject": "PRJNA586865",
        "biosample": "SAMN13256035",
        "wgs_master": "WSMK00000000.1",
        "refseq_category": "na",
        "taxid": "2498093",
        "species_taxid": "2498093",
        "organism_name": "Muribaculaceae bacterium",
        "infraspecific_name": "",
        "isolate": "RACS_022",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/10",
        "asm_name": "ASM1331654v1",
        "submitter": "University of Vienna",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/316/545/GCA_013316545.1_ASM1331654v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-10",
    "dateModified": "2020-06-10",
    "datePublished": "2020-06-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Muribaculaceae bacterium"
        ],
        "sample_taxid": [
            "2498093"
        ],
        "sample_host_organism": [
            "Mus musculus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.520 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.16,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1804419",
        "Number of Sequences": "106",
        "Longest Sequences (bp)": "72924",
        "N50 (bp)": "27828",
        "Gap Ratio (%)": "0.016460",
        "GCcontent (%)": "53.1",
        "Number of CDSs": "1403",
        "Average Protein Length": "382.3",
        "Coding Ratio (%)": "89.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "21",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Muribaculum gordoncarteri",
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                "accession": "GCA_004803695.1",
                "taxid": 2530390,
                "species_taxid": 2530390,
                "relation_to_type": "type",
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                "matched_fragments": 54,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duncaniella muris",
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                "accession": "GCA_003024805.1",
                "taxid": 2094150,
                "species_taxid": 2094150,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paramuribaculum intestinale",
                "strain": "strain=DSM 100749",
                "accession": "GCA_003024925.1",
                "taxid": 2094151,
                "species_taxid": 2094151,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.8167,
                "matched_fragments": 60,
                "total_fragments": 546,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Duncaniella dubosii",
                "strain": "strain=H5",
                "accession": "GCA_004803915.1",
                "taxid": 2518971,
                "species_taxid": 2518971,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.7763,
                "matched_fragments": 53,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 66.16,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_011959405.1",
                "gtdb_species": "s__UBA3263 sp001689615",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.21",
                "min_intra_species_ani": "99.09",
                "mean_intra_species_af": "0.70",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 12,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_002490725.1",
                "gtdb_species": "s__UBA3263 sp002490725",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "99.92",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCF_004803695.1",
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                "ani_circumscription_radius": 95.0,
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                "min_intra_species_ani": "95.63",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA3263",
                "ani_circumscription_radius": 95.0,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__UBA7173",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            {
                "accession": "GCA_014801075.1",
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            {
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                "accession": "GCA_001689495.1",
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        ]
    },
    "_bac2feature": {
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        "cell_length": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "d__Bacteria",
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        "Muribaculaceae",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
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    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}