{
    "type": "genome",
    "identifier": "GCA_013377115.1",
    "organism": "Bacteroidota bacterium",
    "title": "Bacteroidota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Waterloo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013377115.1",
        "bioproject": "PRJNA640240",
        "biosample": "SAMN15371436",
        "wgs_master": "JACAAW000000000.1",
        "refseq_category": "na",
        "taxid": "1898104",
        "species_taxid": "1898104",
        "organism_name": "Bacteroidota bacterium",
        "infraspecific_name": "",
        "isolate": "Cfx2-01",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/06/30",
        "asm_name": "ASM1337711v1",
        "submitter": "University of Waterloo",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/377/115/GCA_013377115.1_ASM1337711v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-06-30",
    "dateModified": "2020-06-30",
    "datePublished": "2020-06-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidota bacterium"
        ],
        "sample_taxid": [
            "1898104"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: near Kenora, Ontario, Lake 227, IISD-Experimental Lakes Area"
        ],
        "sample_host_location_id": [],
        "data_size": "1.117 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4023978",
        "Number of Sequences": "296",
        "Longest Sequences (bp)": "88664",
        "N50 (bp)": "22103",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "32.3",
        "Number of CDSs": "3033",
        "Average Protein Length": "354.9",
        "Coding Ratio (%)": "80.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Lutibacter flavus",
                "strain": "strain=DSM 27993",
                "accession": "GCA_900188355.1",
                "taxid": 691689,
                "species_taxid": 691689,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4797,
                "matched_fragments": 50,
                "total_fragments": 1192,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium panacis",
                "strain": "strain=DCY106",
                "accession": "GCA_024649945.1",
                "taxid": 2962567,
                "species_taxid": 2962567,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9077,
                "matched_fragments": 50,
                "total_fragments": 1192,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium jejuense",
                "strain": "strain=EC11",
                "accession": "GCA_006491595.2",
                "taxid": 1544455,
                "species_taxid": 1544455,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7581,
                "matched_fragments": 52,
                "total_fragments": 1192,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polaribacter cellanae",
                "strain": "strain=SM13",
                "accession": "GCA_017569185.1",
                "taxid": 2818493,
                "species_taxid": 2818493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7568,
                "matched_fragments": 50,
                "total_fragments": 1192,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 8.33,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013377115.1",
                "gtdb_species": "s__Cfx2-01 sp013377115",
                "ani": 100.0,
                "matched_fragments": 1179,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__CG2-30-32-10;g__Cfx2-01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_903899825.1",
                "gtdb_species": "s__JACABE01 sp903899825",
                "ani": 75.839,
                "matched_fragments": 58,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JACABE01;g__JACABE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013377005.1",
                "gtdb_species": "s__JACABE01 sp013377005",
                "ani": 75.6432,
                "matched_fragments": 82,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JACABE01;g__JACABE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903913285.1",
                "gtdb_species": "s__CAIWKO01 sp903913285",
                "ani": 75.5759,
                "matched_fragments": 52,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__CAIWKO01;g__CAIWKO01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.97",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903922465.1",
                "gtdb_species": "s__CAIXTV01 sp903922465",
                "ani": 75.3814,
                "matched_fragments": 55,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__CAIXTV01;g__CAIXTV01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903936865.1",
                "gtdb_species": "s__JACABE01 sp903936865",
                "ani": 75.3143,
                "matched_fragments": 82,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__JACABE01;g__JACABE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013696965.1",
                "gtdb_species": "s__JACCXN01 sp013696965",
                "ani": 75.1564,
                "matched_fragments": 53,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__AKYH767;f__JACCXN01;g__JACCXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001769505.1",
                "gtdb_species": "s__GWF2-33-38 sp001769505",
                "ani": 75.0931,
                "matched_fragments": 52,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__GWF2-33-38;g__GWF2-33-38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_004121075.1",
                "gtdb_species": "s__Lutibacter sp004121075",
                "ani": 75.0866,
                "matched_fragments": 54,
                "total_fragments": 1192,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Lutibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__CG2-30-32-10",
        "g__Cfx2-01",
        "s__Cfx2-01 sp013377115"
    ],
    "_genome_taxon": [
        "Bacteroidota",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__CG2-30-32-10",
        "g__Cfx2-01",
        "s__Cfx2-01 sp013377115",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "CG2-30-32-10",
        "Cfx2-01",
        "Cfx2-01",
        "sp013377115"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0000024",
            "label": "lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}