{
    "type": "genome",
    "identifier": "GCA_013540595.1",
    "organism": "Pyrodictium sp.",
    "title": "Pyrodictium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Sao Paulo",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013540595.1",
        "bioproject": "PRJNA615910",
        "biosample": "SAMN14533095",
        "wgs_master": "JABXKE000000000.1",
        "refseq_category": "na",
        "taxid": "1970082",
        "species_taxid": "1970082",
        "organism_name": "Pyrodictium sp.",
        "infraspecific_name": "",
        "isolate": "DIMAG01",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/23",
        "asm_name": "ASM1354059v1",
        "submitter": "University of Sao Paulo",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/540/595/GCA_013540595.1_ASM1354059v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-23",
    "dateModified": "2020-07-23",
    "datePublished": "2020-07-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pyrodictium sp."
        ],
        "sample_taxid": [
            "1970082"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica: Deception Island Volcano"
        ],
        "sample_host_location_id": [],
        "data_size": "0.417 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1457804",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "1373995",
        "N50 (bp)": "1373995",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.3",
        "Number of CDSs": "1524",
        "Average Protein Length": "277.3",
        "Coding Ratio (%)": "87.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "29",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013540595.1",
                "gtdb_species": "s__QNYQ01 sp013540595",
                "ani": 100.0,
                "matched_fragments": 484,
                "total_fragments": 484,
                "gtdb_taxonomy": "d__Archaea;p__Thermoproteota;c__Thermoproteia;o__Sulfolobales;f__Pyrodictiaceae;g__QNYQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.349,
        "cell_length": null,
        "doubling_h": -0.027,
        "growth_tmp": 95.837,
        "optimum_tmp": 103.0,
        "optimum_ph": null,
        "genome_size": 1824678.8,
        "gc_content": 58.698,
        "coding_genes": 2013.667,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 48.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 1.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoproteota",
        "c__Thermoprotei_A",
        "o__Sulfolobales",
        "f__Pyrodictiaceae",
        "g__QNYQ01",
        "s__QNYQ01 sp013540595"
    ],
    "_genome_taxon": [
        "Pyrodictium",
        "sp.",
        "d__Archaea",
        "p__Thermoproteota",
        "c__Thermoprotei_A",
        "o__Sulfolobales",
        "f__Pyrodictiaceae",
        "g__QNYQ01",
        "s__QNYQ01 sp013540595",
        "Archaea",
        "Thermoproteota",
        "Thermoprotei",
        "A",
        "Sulfolobales",
        "Pyrodictiaceae",
        "QNYQ01",
        "QNYQ01",
        "sp013540595"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}