{ "type": "genome", "identifier": "GCA_013607665.1", "organism": "Campylobacterota bacterium", "title": "Campylobacterota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Institute of Oceanology, Chinese Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013607665.1", "bioproject": "PRJNA532304", "biosample": "SAMN11445328", "wgs_master": "VCAX00000000.1", "refseq_category": "na", "taxid": "2026809", "species_taxid": "2026809", "organism_name": "Campylobacterota bacterium", "infraspecific_name": "", "isolate": "symbiont_bin2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/23", "asm_name": "ASM1360766v1", "submitter": "Institute of Oceanology, Chinese Academy of Sciences", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/607/665/GCA_013607665.1_ASM1360766v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-23", "dateModified": "2020-07-23", "datePublished": "2020-07-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Campylobacterota bacterium" ], "sample_taxid": [ "2026809" ], "sample_host_organism": [ "Alviniconcha boucheti" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Pacific Ocean: Manus Basin" ], "sample_host_location_id": [], "data_size": "0.436 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 87.5, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1527333", "Number of Sequences": "141", "Longest Sequences (bp)": "69442", "N50 (bp)": "18588", "Gap Ratio (%)": "0.000458", "GCcontent (%)": "38.8", "Number of CDSs": "1612", "Average Protein Length": "279.4", "Coding Ratio (%)": "88.5", "Number of rRNAs": "0", "Number of tRNAs": "30", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Sulfurimonas indica", "strain": "strain=NW8N", "accession": "GCA_009192995.1", "taxid": 2508707, "species_taxid": 2508707, "relation_to_type": "type", "validated": true, "ani": 82.321, "matched_fragments": 347, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas paralvinellae", "strain": "strain=GO25", "accession": "GCA_014905135.1", "taxid": 317658, "species_taxid": 317658, "relation_to_type": "type", "validated": true, "ani": 81.4662, "matched_fragments": 337, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas autotrophica", "strain": "strain=DSM 16294", "accession": "GCA_000147355.1", "taxid": 202747, "species_taxid": 202747, "relation_to_type": "type", "validated": true, "ani": 79.2947, "matched_fragments": 216, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas hydrogeniphila", "strain": "strain=NW10", "accession": "GCA_009068765.1", "taxid": 2509341, "species_taxid": 2509341, "relation_to_type": "type", "validated": true, "ani": 78.71, "matched_fragments": 200, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas sediminis", "strain": "strain=S2-6", "accession": "GCA_014905115.1", "taxid": 2590020, "species_taxid": 2590020, "relation_to_type": "type", "validated": true, "ani": 78.696, "matched_fragments": 211, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas crateris", "strain": "strain=SN118", "accession": "GCA_005217605.1", "taxid": 2574727, "species_taxid": 2574727, "relation_to_type": "type", "validated": true, "ani": 78.1446, "matched_fragments": 100, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas lithotrophica", "strain": "strain=GYSZ_1", "accession": "GCA_009258225.1", "taxid": 2590022, "species_taxid": 2590022, "relation_to_type": "type", "validated": true, "ani": 77.8695, "matched_fragments": 101, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas gotlandica", "strain": "strain=GD1", "accession": "GCA_000242915.2", "taxid": 1176482, "species_taxid": 1176482, "relation_to_type": "type", "validated": true, "ani": 77.5156, "matched_fragments": 119, "total_fragments": 443, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurimonas gotlandica", "strain": 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