{
    "type": "genome",
    "identifier": "GCA_013619035.1",
    "organism": "Peptostreptococcaceae bacterium",
    "title": "Peptostreptococcaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Vienna",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013619035.1",
        "bioproject": "PRJNA609450",
        "biosample": "SAMN14421530",
        "wgs_master": "JABXKX000000000.1",
        "refseq_category": "na",
        "taxid": "1904861",
        "species_taxid": "1904861",
        "organism_name": "Peptostreptococcaceae bacterium",
        "infraspecific_name": "",
        "isolate": "42483_Bin_0_Spades_Anvio",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/24",
        "asm_name": "ASM1361903v1",
        "submitter": "University of Vienna",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/619/035/GCA_013619035.1_ASM1361903v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-24",
    "dateModified": "2020-07-24",
    "datePublished": "2020-07-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Peptostreptococcaceae bacterium"
        ],
        "sample_taxid": [
            "1904861"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Greenland: Nuuk fjord"
        ],
        "sample_host_location_id": [],
        "data_size": "1.118 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 6.25,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3936186",
        "Number of Sequences": "643",
        "Longest Sequences (bp)": "35415",
        "N50 (bp)": "6873",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "33.4",
        "Number of CDSs": "3250",
        "Average Protein Length": "307.8",
        "Coding Ratio (%)": "76.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "12",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 6.25,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013619035.1",
                "gtdb_species": "s__JABXKX01 sp013619035",
                "ani": 100.0,
                "matched_fragments": 975,
                "total_fragments": 994,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Acidaminobacteraceae;g__JABXKX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_016342415.1",
                "gtdb_species": "s__JABXKX01 sp016342415",
                "ani": 89.2095,
                "matched_fragments": 800,
                "total_fragments": 994,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Acidaminobacteraceae;g__JABXKX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016937975.1",
                "gtdb_species": "s__JABXKX01 sp016937975",
                "ani": 78.0132,
                "matched_fragments": 163,
                "total_fragments": 994,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Acidaminobacteraceae;g__JABXKX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.175,
        "cell_length": 0.317,
        "doubling_h": -0.16,
        "growth_tmp": 37.619,
        "optimum_tmp": 36.241,
        "optimum_ph": 7.158,
        "genome_size": 2823600.285,
        "gc_content": 34.224,
        "coding_genes": 2877.481,
        "rRNA16S_genes": 9.333,
        "tRNA_genes": 77.152,
        "gram_stain": 0.961,
        "sporulation": 0.777,
        "motility": 0.916,
        "range_salinity": 0.666,
        "facultative_respiration": 0.047,
        "anaerobic_respiration": 0.952,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.9,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.1,
        "bacillus_cell_shape": 0.875,
        "coccus_cell_shape": 0.125,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Acidaminobacteraceae",
        "g__JABXKX01",
        "s__JABXKX01 sp013619035"
    ],
    "_genome_taxon": [
        "Peptostreptococcaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Peptostreptococcales",
        "f__Acidaminobacteraceae",
        "g__JABXKX01",
        "s__JABXKX01 sp013619035",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Peptostreptococcales",
        "Acidaminobacteraceae",
        "JABXKX01",
        "JABXKX01",
        "sp013619035"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}