{
    "type": "genome",
    "identifier": "GCA_013693795.1",
    "organism": "Anaerolineae bacterium",
    "title": "Anaerolineae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Singapore Centre for Environmental Life Sciences Engineering",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013693795.1",
        "bioproject": "PRJNA606905",
        "biosample": "SAMN15246511",
        "wgs_master": "",
        "refseq_category": "na",
        "taxid": "2052143",
        "species_taxid": "2052143",
        "organism_name": "Anaerolineae bacterium",
        "infraspecific_name": "",
        "isolate": "SSC4",
        "version_status": "latest",
        "assembly_level": "Chromosome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/25",
        "asm_name": "ASM1369379v1",
        "submitter": "Singapore Centre for Environmental Life Sciences Engineering",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/693/795/GCA_013693795.1_ASM1369379v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-25",
    "dateModified": "2020-07-25",
    "datePublished": "2020-07-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerolineae bacterium"
        ],
        "sample_taxid": [
            "2052143"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Singapore: Jurong West"
        ],
        "sample_host_location_id": [],
        "data_size": "1.307 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 90.45,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4685957",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4685957",
        "N50 (bp)": "4685957",
        "Gap Ratio (%)": "0.342449",
        "GCcontent (%)": "63.9",
        "Number of CDSs": "4599",
        "Average Protein Length": "277.2",
        "Coding Ratio (%)": "81.6",
        "Number of rRNAs": "3",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "6"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Amycolatopsis suaedae",
                "strain": "strain=8-3EHSu",
                "accession": "GCA_004214935.1",
                "taxid": 2510978,
                "species_taxid": 2510978,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 94,
                "total_fragments": 1562,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera aminoaromatica",
                "strain": "strain=S2",
                "accession": "GCA_000310185.1",
                "taxid": 164330,
                "species_taxid": 164330,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7592,
                "matched_fragments": 50,
                "total_fragments": 1562,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 90.45,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_013693795.1",
                "gtdb_species": "s__SSC4 sp013693795",
                "ani": 100.0,
                "matched_fragments": 1562,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SSC4;f__SSC4;g__SSC4",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_014879765.1",
                "gtdb_species": "s__JAAEKA01 sp014879765",
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                "matched_fragments": 221,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__JAAEKA01;f__JAAEKA01;g__JAAEKA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016719785.1",
                "gtdb_species": "s__JADJYJ01 sp016719785",
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                "matched_fragments": 315,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SSC4;f__SSC4;g__JADJYJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.64",
                "min_intra_species_ani": "98.62",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_014155705.1",
                "gtdb_species": "s__JAAEKA01 sp014155705",
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                "matched_fragments": 84,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__JAAEKA01;f__JAAEKA01;g__JAAEKA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015494005.1",
                "gtdb_species": "s__S144-5 sp015494005",
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                "matched_fragments": 61,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__S144-5",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014383605.1",
                "gtdb_species": "s__NIOZ-UU15 sp014383605",
                "ani": 75.4782,
                "matched_fragments": 64,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA3071;f__UBA3071;g__NIOZ-UU15",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011367385.1",
                "gtdb_species": "s__SpSt-583 sp011367385",
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                "matched_fragments": 115,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__SpSt-583",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016861025.1",
                "gtdb_species": "s__Caldilinea sp016861025",
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                "matched_fragments": 82,
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                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017999235.1",
                "gtdb_species": "s__SpSt-583 sp017999235",
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                "matched_fragments": 83,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__SpSt-583",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016926595.1",
                "gtdb_species": "s__JAFGOG01 sp016926595",
                "ani": 75.1634,
                "matched_fragments": 78,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__JAAYZQ01;f__JAAYZQ01;g__JAFGOG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011046615.1",
                "gtdb_species": "s__DSPQ01 sp011046615",
                "ani": 75.1415,
                "matched_fragments": 53,
                "total_fragments": 1562,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__E44-bin32;g__DSPQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__SSC4",
        "f__SSC4",
        "g__SSC4",
        "s__SSC4 sp013693795"
    ],
    "_genome_taxon": [
        "Anaerolineae",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__SSC4",
        "f__SSC4",
        "g__SSC4",
        "s__SSC4 sp013693795",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "SSC4",
        "SSC4",
        "SSC4",
        "SSC4",
        "sp013693795"
    ],
    "_meo": [
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        },
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}