{
    "type": "genome",
    "identifier": "GCA_013694635.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013694635.1",
        "bioproject": "PRJNA630822",
        "biosample": "SAMN15052179",
        "wgs_master": "JACDCA000000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "MGR_bin296",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/26",
        "asm_name": "ASM1369463v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/694/635/GCA_013694635.1_ASM1369463v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-26",
    "dateModified": "2020-07-26",
    "datePublished": "2020-07-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica: Mackay Glacier regions"
        ],
        "sample_host_location_id": [],
        "data_size": "1.047 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 94.44,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3718785",
        "Number of Sequences": "783",
        "Longest Sequences (bp)": "30917",
        "N50 (bp)": "5338",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.2",
        "Number of CDSs": "2699",
        "Average Protein Length": "309.1",
        "Coding Ratio (%)": "67.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Luteitalea pratensis",
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                "accession": "GCA_001618865.1",
                "taxid": 1855912,
                "species_taxid": 1855912,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 120,
                "total_fragments": 796,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sandaracinus amylolyticus",
                "strain": "strain=DSM 53668",
                "accession": "GCA_000737325.2",
                "taxid": 927083,
                "species_taxid": 927083,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9585,
                "matched_fragments": 100,
                "total_fragments": 796,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter americanus",
                "strain": "strain=DSM 16676",
                "accession": "GCA_000420025.1",
                "taxid": 588672,
                "species_taxid": 588672,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7765,
                "matched_fragments": 52,
                "total_fragments": 796,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
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                "accession": "GCA_013694635.1",
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                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACDCA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_013813355.1",
                "gtdb_species": "s__JACCRT01 sp013813355",
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                "matched_fragments": 86,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACCRT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001767455.1",
                "gtdb_species": "s__2-12-FULL-66-21 sp001767455",
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                "matched_fragments": 245,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__2-12-FULL-66-21",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.91",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013817065.1",
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                "ani": 78.2446,
                "matched_fragments": 222,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACDCA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013694845.1",
                "gtdb_species": "s__JACDCA01 sp013694845",
                "ani": 77.8474,
                "matched_fragments": 257,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACDCA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003223835.1",
                "gtdb_species": "s__Gp6-AA38 sp003223835",
                "ani": 77.7614,
                "matched_fragments": 218,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__Gp6-AA38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.48",
                "min_intra_species_ani": "98.48",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003222675.1",
                "gtdb_species": "s__QHWT01 sp003222675",
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                "matched_fragments": 206,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013697225.1",
                "gtdb_species": "s__JACCXG01 sp013697225",
                "ani": 77.6831,
                "matched_fragments": 120,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__JACCXG01",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013362195.1",
                "gtdb_species": "s__QHWT01 sp013362195",
                "ani": 77.2535,
                "matched_fragments": 167,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003222535.1",
                "gtdb_species": "s__Gp6-AA45 sp003222535",
                "ani": 76.8332,
                "matched_fragments": 142,
                "total_fragments": 796,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__Gp6-AA45",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.30",
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                "status": "-"
            },
            {
                "accession": "GCA_012271165.1",
                "gtdb_species": "s__JAAXGX01 sp012271165",
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                "matched_fragments": 50,
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__JAAXGX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__2-12-FULL-66-21",
        "g__JACDCA01",
        "s__JACDCA01 sp013694635"
    ],
    "_genome_taxon": [
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        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Vicinamibacteria",
        "o__Vicinamibacterales",
        "f__2-12-FULL-66-21",
        "g__JACDCA01",
        "s__JACDCA01 sp013694635",
        "Bacteria",
        "Acidobacteriota",
        "Vicinamibacteria",
        "Vicinamibacterales",
        "2-12-FULL-66-21",
        "JACDCA01",
        "JACDCA01",
        "sp013694635"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}