{
    "type": "genome",
    "identifier": "GCA_013694745.1",
    "organism": "Chitinophagaceae bacterium",
    "title": "Chitinophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013694745.1",
        "bioproject": "PRJNA630822",
        "biosample": "SAMN15052173",
        "wgs_master": "JACDBU000000000.1",
        "refseq_category": "na",
        "taxid": "1869212",
        "species_taxid": "1869212",
        "organism_name": "Chitinophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "MGR_bin290",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/26",
        "asm_name": "ASM1369474v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/694/745/GCA_013694745.1_ASM1369474v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-26",
    "dateModified": "2020-07-26",
    "datePublished": "2020-07-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophagaceae bacterium"
        ],
        "sample_taxid": [
            "1869212"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica: Mackay Glacier regions"
        ],
        "sample_host_location_id": [],
        "data_size": "0.780 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 84.03,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2746850",
        "Number of Sequences": "261",
        "Longest Sequences (bp)": "46408",
        "N50 (bp)": "15293",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.4",
        "Number of CDSs": "2184",
        "Average Protein Length": "323.4",
        "Coding Ratio (%)": "77.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Ginsengibacter hankyongi",
                "strain": "strain=BR5-29",
                "accession": "GCA_008710285.1",
                "taxid": 2607284,
                "species_taxid": 2607284,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2658,
                "matched_fragments": 118,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hanamia caeni",
                "strain": "strain=BO-59",
                "accession": "GCA_003721595.1",
                "taxid": 2294116,
                "species_taxid": 2294116,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8971,
                "matched_fragments": 61,
                "total_fragments": 776,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 84.03,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013694745.1",
                "gtdb_species": "s__Ginsengibacter sp013694745",
                "ani": 100.0,
                "matched_fragments": 767,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017882215.1",
                "gtdb_species": "s__Ginsengibacter sp017882215",
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                "matched_fragments": 177,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002050465.1",
                "gtdb_species": "s__Ginsengibacter sp002050465",
                "ani": 76.7125,
                "matched_fragments": 112,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_008710285.1",
                "gtdb_species": "s__Ginsengibacter hankyongi",
                "ani": 76.2658,
                "matched_fragments": 118,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013141115.1",
                "gtdb_species": "s__Ferruginibacter sp013141115",
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                "matched_fragments": 75,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016786725.1",
                "gtdb_species": "s__Ferruginibacter sp016786725",
                "ani": 76.1276,
                "matched_fragments": 78,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016710745.1",
                "gtdb_species": "s__Ferruginibacter sp016710745",
                "ani": 76.0421,
                "matched_fragments": 53,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017882205.1",
                "gtdb_species": "s__Ginsengibacter sp017882205",
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                "matched_fragments": 60,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017983695.1",
                "gtdb_species": "s__Ferruginibacter sp017983695",
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                "matched_fragments": 77,
                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003721595.1",
                "gtdb_species": "s__Ginsengibacter sp003721595",
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                "total_fragments": 776,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ginsengibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_016720775.1",
                "gtdb_species": "s__Ferruginibacter sp016720775",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016710935.1",
                "gtdb_species": "s__Ferruginibacter sp016710935",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_001898465.1",
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                "mean_intra_species_ani": "99.99",
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            },
            {
                "accession": "GCF_007971225.1",
                "gtdb_species": "s__Panacibacter ginsenosidivorans",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Panacibacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.322,
        "cell_length": 0.364,
        "doubling_h": null,
        "growth_tmp": 30.538,
        "optimum_tmp": 29.829,
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        "genome_size": 5998721.602,
        "gc_content": 44.915,
        "coding_genes": 5429.047,
        "rRNA16S_genes": 3.5,
        "tRNA_genes": 54.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.225,
        "range_salinity": null,
        "facultative_respiration": 0.034,
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        "mesophilic_range_tmp": 0.75,
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        "psychrophilic_range_tmp": 0.25,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__JADGPY01",
        "s__JADGPY01 sp013694745"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__JADGPY01",
        "s__JADGPY01 sp013694745",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "JADGPY01",
        "JADGPY01",
        "sp013694745"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}