{ "type": "genome", "identifier": "GCA_013696665.1", "organism": "Burkholderiaceae bacterium", "title": "Burkholderiaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Monash University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013696665.1", "bioproject": "PRJNA630822", "biosample": "SAMN15052077", "wgs_master": "JACCYC000000000.1", "refseq_category": "na", "taxid": "2030806", "species_taxid": "2030806", "organism_name": "Burkholderiaceae bacterium", "infraspecific_name": "", "isolate": "MGR_bin194", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/26", "asm_name": "ASM1369666v1", "submitter": "Monash University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/696/665/GCA_013696665.1_ASM1369666v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-26", "dateModified": "2020-07-26", "datePublished": "2020-07-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Burkholderiaceae bacterium" ], "sample_taxid": [ "2030806" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica: Mackay Glacier regions" ], "sample_host_location_id": [], "data_size": "0.720 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 74.62, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2529082", "Number of Sequences": "390", "Longest Sequences (bp)": "44616", "N50 (bp)": "7880", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "60.2", "Number of CDSs": "2094", "Average Protein Length": "297.9", "Coding Ratio (%)": "74.0", "Number of rRNAs": "0", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Verticiella sediminum", "strain": "strain=DSM 27279", "accession": "GCA_007558815.1", "taxid": 1247510, "species_taxid": 1247510, "relation_to_type": "type", "validated": true, "ani": 76.1545, "matched_fragments": 53, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella aceris", "strain": "strain=SAP-35", "accession": "GCA_011090165.1", "taxid": 2703883, "species_taxid": 2703883, "relation_to_type": "type", "validated": true, "ani": 76.1256, "matched_fragments": 60, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia mayonis", "strain": "strain=BDU6", "accession": "GCA_001523745.2", "taxid": 1385591, "species_taxid": 1385591, "relation_to_type": "type", "validated": true, "ani": 76.041, "matched_fragments": 65, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus gilardii", "strain": "strain=ATCC 700815", "accession": "GCA_013004615.1", "taxid": 82541, "species_taxid": 82541, "relation_to_type": "type", "validated": true, "ani": 75.9715, "matched_fragments": 81, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus gilardii", "strain": "strain=CCUG 38401", "accession": "GCA_008801915.1", "taxid": 82541, "species_taxid": 82541, "relation_to_type": "type", "validated": true, "ani": 75.9657, "matched_fragments": 80, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia thailandensis", "strain": "strain=E264; ATCC 700388", "accession": "GCA_000012365.1", "taxid": 57975, "species_taxid": 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