{ "type": "genome", "identifier": "GCA_013697725.1", "organism": "Tatlockia sp.", "title": "Tatlockia sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Monash University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013697725.1", "bioproject": "PRJNA630822", "biosample": "SAMN15052031", "wgs_master": "JACCWI000000000.1", "refseq_category": "na", "taxid": "2740535", "species_taxid": "2740535", "organism_name": "Tatlockia sp.", "infraspecific_name": "", "isolate": "MGR_bin148", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/26", "asm_name": "ASM1369772v1", "submitter": "Monash University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/697/725/GCA_013697725.1_ASM1369772v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-26", "dateModified": "2020-07-26", "datePublished": "2020-07-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Tatlockia sp." ], "sample_taxid": [ "2740535" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica: Mackay Glacier regions" ], "sample_host_location_id": [], "data_size": "0.858 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 75.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3012235", "Number of Sequences": "60", "Longest Sequences (bp)": "407758", "N50 (bp)": "173062", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.8", "Number of CDSs": "2603", "Average Protein Length": "336.1", "Coding Ratio (%)": "87.1", "Number of rRNAs": "0", "Number of tRNAs": "32", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Legionella feeleii", "strain": "strain=NCTC12022", "accession": "GCA_900452475.1", "taxid": 453, "species_taxid": 453, "relation_to_type": "type", "validated": true, "ani": 77.6818, "matched_fragments": 103, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella massiliensis", "strain": "strain=LegA", "accession": "GCA_000756815.1", "taxid": 1034943, "species_taxid": 1034943, "relation_to_type": "type", "validated": true, "ani": 77.487, "matched_fragments": 140, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella feeleii", "strain": "strain=ATCC 35072", "accession": "GCA_001648615.1", "taxid": 453, "species_taxid": 453, "relation_to_type": "type", 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973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tatlockia micdadei", "strain": "strain=ATCC 33218", "accession": "GCA_001648625.1", "taxid": 451, "species_taxid": 451, "relation_to_type": "type", "validated": true, "ani": 77.2356, "matched_fragments": 104, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tatlockia micdadei", "strain": "strain=ATCC33218", "accession": "GCA_000953635.1", "taxid": 451, "species_taxid": 451, "relation_to_type": "type", "validated": true, "ani": 77.2268, "matched_fragments": 103, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella pneumophila subsp. pneumophila", "strain": "strain=PartS-Lpneumophila-RM8376", "accession": "GCA_022870105.1", "taxid": 91891, "species_taxid": 446, "relation_to_type": "type", "validated": true, "ani": 77.1737, "matched_fragments": 62, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tatlockia micdadei", "strain": "strain=ATCC 33218", "accession": "GCA_900102325.1", "taxid": 451, "species_taxid": 451, "relation_to_type": "type", "validated": true, "ani": 77.1681, "matched_fragments": 102, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella fairfieldensis", "strain": "strain=1725-Aus-E", "accession": "GCA_900640125.1", "taxid": 45064, "species_taxid": 45064, "relation_to_type": "type", "validated": true, "ani": 77.1486, "matched_fragments": 112, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella pneumophila", "strain": "strain=NCTC11192", "accession": "GCA_900452735.1", "taxid": 446, "species_taxid": 446, "relation_to_type": "type", "validated": true, "ani": 77.1298, "matched_fragments": 63, "total_fragments": 973, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Legionella anisa", "strain": 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