{
    "type": "genome",
    "identifier": "GCA_013813905.1",
    "organism": "Chloroflexota bacterium",
    "title": "Chloroflexota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_013813905.1",
        "bioproject": "PRJNA630822",
        "biosample": "SAMN15051890",
        "wgs_master": "JACCQX000000000.1",
        "refseq_category": "na",
        "taxid": "2026724",
        "species_taxid": "2026724",
        "organism_name": "Chloroflexota bacterium",
        "infraspecific_name": "",
        "isolate": "MGR_bin7",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/28",
        "asm_name": "ASM1381390v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/813/905/GCA_013813905.1_ASM1381390v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-28",
    "dateModified": "2020-07-28",
    "datePublished": "2020-07-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chloroflexota bacterium"
        ],
        "sample_taxid": [
            "2026724"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica: Mackay Glacier regions"
        ],
        "sample_host_location_id": [],
        "data_size": "0.363 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 67.9,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1320688",
        "Number of Sequences": "198",
        "Longest Sequences (bp)": "22150",
        "N50 (bp)": "8202",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.6",
        "Number of CDSs": "1113",
        "Average Protein Length": "296.5",
        "Coding Ratio (%)": "75.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "18",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 67.9,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013813905.1",
                "gtdb_species": "s__Palsa-1032 sp013813905",
                "ani": 100.0,
                "matched_fragments": 344,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__Palsa-1032",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003169735.1",
                "gtdb_species": "s__Palsa-1032 sp003169735",
                "ani": 77.9462,
                "matched_fragments": 132,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__Palsa-1032",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.71",
                "min_intra_species_ani": "99.69",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_001443375.1",
                "gtdb_species": "s__CSP1-4 sp001443375",
                "ani": 77.822,
                "matched_fragments": 120,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__CSP1-4",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013696945.1",
                "gtdb_species": "s__Palsa-1032 sp013696945",
                "ani": 77.5317,
                "matched_fragments": 79,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__Palsa-1032",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013694835.1",
                "gtdb_species": "s__JACDBP01 sp013694835",
                "ani": 77.2786,
                "matched_fragments": 58,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__JACDBP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017881985.1",
                "gtdb_species": "s__CTSoil-043 sp017881985",
                "ani": 76.8644,
                "matched_fragments": 58,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__CTSoil-043",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016781485.1",
                "gtdb_species": "s__YB3-1 sp016781485",
                "ani": 76.5235,
                "matched_fragments": 59,
                "total_fragments": 346,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Limnocylindria;o__Limnocylindrales;f__CSP1-4;g__YB3-1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Limnocylindria",
        "o__Limnocylindrales",
        "f__CSP1-4",
        "g__Palsa-1032",
        "s__Palsa-1032 sp013813905"
    ],
    "_genome_taxon": [
        "Chloroflexota",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Limnocylindria",
        "o__Limnocylindrales",
        "f__CSP1-4",
        "g__Palsa-1032",
        "s__Palsa-1032 sp013813905",
        "Bacteria",
        "Chloroflexota",
        "Limnocylindria",
        "Limnocylindrales",
        "CSP1-4",
        "Palsa-1032",
        "Palsa-1032",
        "sp013813905"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}