{ "type": "genome", "identifier": "GCA_013822485.1", "organism": "Sphingobium sp.", "title": "Sphingobium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Illinois at Urbana-Champaign", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013822485.1", "bioproject": "PRJNA323575", "biosample": "SAMN08286400", "wgs_master": "PNKO00000000.1", "refseq_category": "na", "taxid": "1912891", "species_taxid": "1912891", "organism_name": "Sphingobium sp.", "infraspecific_name": "", "isolate": "PB2.3.55", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/28", "asm_name": "ASM1382248v1", "submitter": "University of Illinois at Urbana-Champaign", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/822/485/GCA_013822485.1_ASM1382248v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-28", "dateModified": "2020-07-28", "datePublished": "2020-07-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobium sp." ], "sample_taxid": [ "1912891" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Illinois, Champaign" ], "sample_host_location_id": [], "data_size": "1.043 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 66.71, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3778027", "Number of Sequences": "33", "Longest Sequences (bp)": "461507", "N50 (bp)": "168869", "Gap Ratio (%)": 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86193, "relation_to_type": "type", "validated": true, "ani": 83.2422, "matched_fragments": 622, "total_fragments": 1242, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium amiense", "strain": "strain=DSM 16289", "accession": "GCA_003967075.1", "taxid": 135719, "species_taxid": 135719, "relation_to_type": "type", "validated": true, "ani": 83.0395, "matched_fragments": 565, "total_fragments": 1242, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium amiense", "strain": "strain=NBRC 102518", "accession": "GCA_001591305.1", "taxid": 135719, "species_taxid": 135719, "relation_to_type": "type", "validated": true, "ani": 83.0138, "matched_fragments": 563, "total_fragments": 1242, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium lactosutens", "strain": "strain=DS20", "accession": "GCA_000445105.1", "taxid": 522773, "species_taxid": 522773, "relation_to_type": "type", "validated": true, "ani": 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