{ "type": "genome", "identifier": "GCA_013911385.1", "organism": "Alcanivorax sp.", "title": "Alcanivorax sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Evolutionary Genomics Group", "publication": [ {} ], "properties": { "assembly_accession": "GCA_013911385.1", "bioproject": "PRJNA638822", "biosample": "SAMN15215254", "wgs_master": "JACETG000000000.1", "refseq_category": "na", "taxid": "1872427", "species_taxid": "1872427", "organism_name": "Alcanivorax sp.", "infraspecific_name": "", "isolate": "MCMED-G36", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/29", "asm_name": "ASM1391138v1", "submitter": "Evolutionary Genomics Group", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/911/385/GCA_013911385.1_ASM1391138v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-29", "dateModified": "2020-07-29", "datePublished": "2020-07-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Alcanivorax sp." ], "sample_taxid": [ "1872427" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain:Coast of Alicante, Western Mediterranean Sea, close to the coast of Guardamar del Segura" ], "sample_host_location_id": [], "data_size": "1.266 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4503477", "Number of Sequences": "67", "Longest Sequences (bp)": "454973", "N50 (bp)": "100610", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.7", "Number of CDSs": "4086", "Average Protein Length": "325.3", "Coding Ratio (%)": "88.5", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Alcanivorax xenomutans", "strain": "strain=JC109", "accession": "GCA_900217905.1", "taxid": 1094342, "species_taxid": 1094342, "relation_to_type": "type", "validated": true, "ani": 98.4583, "matched_fragments": 1317, "total_fragments": 1468, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Alcanivorax balearicus", "strain": "strain=MACL04", "accession": "GCA_025532145.1", "taxid": 413232, "species_taxid": 413232, "relation_to_type": "type", "validated": true, "ani": 94.6587, "matched_fragments": 1284, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax dieselolei", "strain": "strain=CGMCC 1.3690", "accession": "GCA_014644575.1", "taxid": 285091, "species_taxid": 285091, "relation_to_type": "type", "validated": true, "ani": 93.5972, "matched_fragments": 1284, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax dieselolei", "strain": "strain=B5", "accession": "GCA_000300005.1", "taxid": 285091, "species_taxid": 285091, "relation_to_type": "type", "validated": true, "ani": 93.5393, "matched_fragments": 1289, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax profundimaris", "strain": "strain=ST75FaO-1", "accession": "GCA_015265435.1", "taxid": 2735259, "species_taxid": 2735259, "relation_to_type": "type", "validated": true, "ani": 80.5781, "matched_fragments": 726, "total_fragments": 1468, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax marinus", "strain": "strain=R8-12", "accession": "GCA_025532125.1", "taxid": 1177169, 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