{ "type": "genome", "identifier": "GCA_014378295.1", "organism": "Arenimonas sp.", "title": "Arenimonas sp.", "description": "derived from metagenome; fragmented assembly", "data type": "Genome sequencing and assembly", "organization": "Aarhus University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_014378295.1", "bioproject": "PRJNA552582", "biosample": "SAMN14819139", "wgs_master": "JACMNY000000000.1", "refseq_category": "na", "taxid": "1872635", "species_taxid": "1872635", "organism_name": "Arenimonas sp.", "infraspecific_name": "", "isolate": "LF-bin-1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/09/01", "asm_name": "ASM1437829v1", "submitter": "Aarhus University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/378/295/GCA_014378295.1_ASM1437829v1", "excluded_from_refseq": "derived from metagenome; fragmented assembly", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-09-01", "dateModified": "2020-09-01", "datePublished": "2020-09-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Arenimonas sp." ], "sample_taxid": [ "1872635" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Greenland: the Little Firn glacier in the Knuths Fjeld" ], "sample_host_location_id": [], "data_size": "0.653 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 48.61, "contamination": 2.08, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2321402", "Number of Sequences": "631", "Longest Sequences (bp)": "14992", "N50 (bp)": "4027", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "64.0", "Number of CDSs": "1594", "Average Protein Length": "299.2", "Coding Ratio (%)": "61.6", "Number of rRNAs": "0", "Number of tRNAs": "30", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Arenimonas oryziterrae", "strain": "strain=YC6267", "accession": "GCA_000747135.1", "taxid": 498055, "species_taxid": 498055, "relation_to_type": "type", "validated": true, "ani": 79.2277, "matched_fragments": 207, "total_fragments": 433, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas oryziterrae", "strain": "strain=DSM 21050", "accession": "GCA_000420545.1", "taxid": 498055, "species_taxid": 498055, "relation_to_type": "type", "validated": true, "ani": 79.2271, "matched_fragments": 207, "total_fragments": 433, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas terrae", "strain": "strain=R29", "accession": "GCA_006265115.1", 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