{
    "type": "genome",
    "identifier": "GCA_014379745.1",
    "organism": "Pyrinomonadaceae bacterium",
    "title": "Pyrinomonadaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aarhus University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_014379745.1",
        "bioproject": "PRJNA552582",
        "biosample": "SAMN14819067",
        "wgs_master": "JACMLF000000000.1",
        "refseq_category": "na",
        "taxid": "2283092",
        "species_taxid": "2283092",
        "organism_name": "Pyrinomonadaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ES-bin-295",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/01",
        "asm_name": "ASM1437974v1",
        "submitter": "Aarhus University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/379/745/GCA_014379745.1_ASM1437974v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-01",
    "dateModified": "2020-09-01",
    "datePublished": "2020-09-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pyrinomonadaceae bacterium"
        ],
        "sample_taxid": [
            "2283092"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Greenland: the Little Firn glacier in the Knuths Fjeld"
        ],
        "sample_host_location_id": [],
        "data_size": "1.405 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 72.45,
        "contamination": 1.04,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4966319",
        "Number of Sequences": "1106",
        "Longest Sequences (bp)": "28362",
        "N50 (bp)": "5158",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.0",
        "Number of CDSs": "3315",
        "Average Protein Length": "299.2",
        "Coding Ratio (%)": "59.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Pyrinomonas methylaliphatogenes",
                "strain": "strain=type strain:K22",
                "accession": "GCA_000820845.2",
                "taxid": 454194,
                "species_taxid": 454194,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6708,
                "matched_fragments": 91,
                "total_fragments": 1065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardioides nitrophenolicus",
                "strain": "strain=DSM 15529",
                "accession": "GCA_016907515.1",
                "taxid": 60489,
                "species_taxid": 60489,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6209,
                "matched_fragments": 50,
                "total_fragments": 1065,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kitasatospora herbaricolor",
                "strain": "strain=JCM 4138",
                "accession": "GCA_014648975.1",
                "taxid": 68217,
                "species_taxid": 68217,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.4921,
                "matched_fragments": 55,
                "total_fragments": 1065,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 72.45,
            "contamination": 1.04,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_003222975.1",
                "gtdb_species": "s__QHXN01 sp003222975",
                "ani": 81.5527,
                "matched_fragments": 622,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019242475.1",
                "gtdb_species": "s__QHXN01 sp019242475",
                "ani": 79.9729,
                "matched_fragments": 558,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019239425.1",
                "gtdb_species": "s__QHXN01 sp019239425",
                "ani": 79.7903,
                "matched_fragments": 606,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003223935.1",
                "gtdb_species": "s__QHXQ01 sp003223935",
                "ani": 77.151,
                "matched_fragments": 254,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019247865.1",
                "gtdb_species": "s__JACMLC01 sp019247865",
                "ani": 76.8495,
                "matched_fragments": 174,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACMLC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013816505.1",
                "gtdb_species": "s__JACDEG01 sp013816505",
                "ani": 76.7309,
                "matched_fragments": 235,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACDEG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013813825.1",
                "gtdb_species": "s__JACCRA01 sp013813825",
                "ani": 76.5829,
                "matched_fragments": 165,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACCRA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013698055.1",
                "gtdb_species": "s__QHXM01 sp013698055",
                "ani": 76.5406,
                "matched_fragments": 96,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXM01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013696465.1",
                "gtdb_species": "s__JACCYN01 sp013696465",
                "ani": 76.2598,
                "matched_fragments": 118,
                "total_fragments": 1065,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACCYN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Blastocatellia",
        "o__Pyrinomonadales",
        "f__Pyrinomonadaceae",
        "g__QHXN01",
        "s__"
    ],
    "_genome_taxon": [
        "Pyrinomonadaceae",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Blastocatellia",
        "o__Pyrinomonadales",
        "f__Pyrinomonadaceae",
        "g__QHXN01",
        "s__",
        "Bacteria",
        "Acidobacteriota",
        "Blastocatellia",
        "Pyrinomonadales",
        "Pyrinomonadaceae",
        "QHXN01",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000170",
            "label": "glacier"
        },
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}