{
    "type": "genome",
    "identifier": "GCA_014804445.1",
    "organism": "Lachnospiraceae bacterium",
    "title": "Lachnospiraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Jyvaskyla",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_014804445.1",
        "bioproject": "PRJNA613381",
        "biosample": "SAMN14407098",
        "wgs_master": "JAAUZU000000000.1",
        "refseq_category": "na",
        "taxid": "1898203",
        "species_taxid": "1898203",
        "organism_name": "Lachnospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "Mgla_MAG_35-bin_6",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/09/29",
        "asm_name": "ASM1480444v1",
        "submitter": "University of Jyvaskyla",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/804/445/GCA_014804445.1_ASM1480444v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-09-29",
    "dateModified": "2020-09-29",
    "datePublished": "2020-09-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Lachnospiraceae bacterium"
        ],
        "sample_taxid": [
            "1898203"
        ],
        "sample_host_organism": [
            "Myodes glareolus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Ukraine"
        ],
        "sample_host_location_id": [],
        "data_size": "1.027 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "MAG",
    "data_source": "INSDC",
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        "Total Sequence Length (bp)": "3583426",
        "Number of Sequences": "45",
        "Longest Sequences (bp)": "371363",
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        "Gap Ratio (%)": "0.266644",
        "GCcontent (%)": "46.0",
        "Number of CDSs": "3361",
        "Average Protein Length": "319.0",
        "Coding Ratio (%)": "89.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Eisenbergiella massiliensis",
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                "organism_name": "Eisenbergiella tayi",
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                "status": "below_threshold"
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            {
                "organism_name": "Acetatifactor muris",
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            {
                "organism_name": "Kineothrix alysoides",
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                "accession": "GCA_004345255.1",
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                "species_taxid": 1469948,
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                "status": "below_threshold"
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            {
                "organism_name": "Kineothrix alysoides",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Schaedlerella arabinosiphila",
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                "accession": "GCA_003885045.1",
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        "cc_result": {
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}