{
    "type": "genome",
    "identifier": "GCA_014847005.1",
    "organism": "Faecalibacterium sp.",
    "title": "Faecalibacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "SAHMRI",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_014847005.1",
        "bioproject": "PRJNA482729",
        "biosample": "SAMN09694105",
        "wgs_master": "RKCU00000000.1",
        "refseq_category": "na",
        "taxid": "1971605",
        "species_taxid": "1971605",
        "organism_name": "Faecalibacterium sp.",
        "infraspecific_name": "",
        "isolate": "UBG116",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/10/05",
        "asm_name": "ASM1484700v1",
        "submitter": "SAHMRI",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/847/005/GCA_014847005.1_ASM1484700v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-10-05",
    "dateModified": "2020-10-05",
    "datePublished": "2020-10-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Faecalibacterium sp."
        ],
        "sample_taxid": [
            "1971605"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "India: Tamil Nadu"
        ],
        "sample_host_location_id": [],
        "data_size": "0.525 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 45.83,
        "contamination": 8.33,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1871997",
        "Number of Sequences": "282",
        "Longest Sequences (bp)": "38854",
        "N50 (bp)": "7322",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.4",
        "Number of CDSs": "1496",
        "Average Protein Length": "303.7",
        "Coding Ratio (%)": "72.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacterium prausnitzii",
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                "accession": "GCA_003324185.1",
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                "species_taxid": 853,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "matched_fragments": 346,
                "total_fragments": 483,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=JCM 31915",
                "accession": "GCA_010509575.1",
                "taxid": 411483,
                "species_taxid": 411483,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.6356,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=A2-165",
                "accession": "GCA_000162015.1",
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                "species_taxid": 411483,
                "relation_to_type": "type",
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                "ani": 83.5351,
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                "total_fragments": 483,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium hattorii",
                "strain": "strain=APC922/41-1",
                "accession": "GCA_003287455.1",
                "taxid": 2935520,
                "species_taxid": 2935520,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.0996,
                "matched_fragments": 335,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium gallinarum",
                "strain": "strain=JCM 17207",
                "accession": "GCA_022180365.1",
                "taxid": 2903556,
                "species_taxid": 2903556,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3331,
                "matched_fragments": 247,
                "total_fragments": 483,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Subdoligranulum variabile",
                "strain": "strain=DSM 15176",
                "accession": "GCA_025152575.1",
                "taxid": 214851,
                "species_taxid": 214851,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9258,
                "matched_fragments": 132,
                "total_fragments": 483,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 8.33,
            "strain_heterogeneity": 100.0
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        "gtdb_result": [
            {
                "accession": "GCA_900539945.1",
                "gtdb_species": "s__Faecalibacterium sp900539945",
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                "matched_fragments": 404,
                "total_fragments": 483,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.00",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCF_002549775.1",
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                "matched_fragments": 358,
                "total_fragments": 483,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "97.71",
                "mean_intra_species_af": "0.95",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900765105.1",
                "gtdb_species": "s__Faecalibacterium sp900765105",
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                "matched_fragments": 299,
                "total_fragments": 483,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.27",
                "min_intra_species_ani": "98.27",
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                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002549755.1",
                "gtdb_species": "s__Faecalibacterium prausnitzii_D",
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                "matched_fragments": 355,
                "total_fragments": 483,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.37",
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                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 38,
                "status": "-"
            },
            {
                "accession": "GCA_900539885.1",
                "gtdb_species": "s__Faecalibacterium sp900539885",
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                "matched_fragments": 339,
                "total_fragments": 483,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
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                "num_clustered_genomes": 6,
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            {
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                "matched_fragments": 345,
                "total_fragments": 483,
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                "num_clustered_genomes": 47,
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
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            {
                "accession": "GCA_900772565.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003449675.1",
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            {
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
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        "coding_genes": 2678.333,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "p__Bacillota_A",
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        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Ruminococcaceae",
        "Faecalibacterium",
        "Faecalibacterium",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}