{
    "type": "genome",
    "identifier": "GCA_014868665.1",
    "organism": "Faecalibacterium prausnitzii",
    "title": "Faecalibacterium prausnitzii",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_014868665.1",
        "bioproject": "PRJNA562766",
        "biosample": "SAMN12905284",
        "wgs_master": "WHEY00000000.1",
        "refseq_category": "na",
        "taxid": "853",
        "species_taxid": "853",
        "organism_name": "Faecalibacterium prausnitzii",
        "infraspecific_name": "",
        "isolate": "COPD337",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/10/08",
        "asm_name": "ASM1486866v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/868/665/GCA_014868665.1_ASM1486866v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-10-08",
    "dateModified": "2020-10-08",
    "datePublished": "2020-10-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Faecalibacterium prausnitzii"
        ],
        "sample_taxid": [
            "853"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Newcastle"
        ],
        "sample_host_location_id": [],
        "data_size": "0.664 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 53.24,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2356891",
        "Number of Sequences": "309",
        "Longest Sequences (bp)": "52313",
        "N50 (bp)": "11276",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "58.2",
        "Number of CDSs": "2008",
        "Average Protein Length": "290.1",
        "Coding Ratio (%)": "74.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacterium prausnitzii",
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                "species_taxid": 853,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=A2-165",
                "accession": "GCA_000162015.1",
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                "species_taxid": 411483,
                "relation_to_type": "type",
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                "ani": 84.5382,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium duncaniae",
                "strain": "strain=JCM 31915",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium hattorii",
                "strain": "strain=APC922/41-1",
                "accession": "GCA_003287455.1",
                "taxid": 2935520,
                "species_taxid": 2935520,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.4485,
                "matched_fragments": 415,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Faecalibacterium gallinarum",
                "strain": "strain=JCM 17207",
                "accession": "GCA_022180365.1",
                "taxid": 2903556,
                "species_taxid": 2903556,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3422,
                "matched_fragments": 292,
                "total_fragments": 630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Subdoligranulum variabile",
                "strain": "strain=DSM 15176",
                "accession": "GCA_025152575.1",
                "taxid": 214851,
                "species_taxid": 214851,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5551,
                "matched_fragments": 120,
                "total_fragments": 630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fournierella massiliensis",
                "strain": "strain=DSM 100451",
                "accession": "GCA_004345265.1",
                "taxid": 1650663,
                "species_taxid": 1650663,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.7729,
                "matched_fragments": 158,
                "total_fragments": 630,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
            {
                "accession": "GCF_003287405.1",
                "gtdb_species": "s__Faecalibacterium prausnitzii_J",
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                "matched_fragments": 552,
                "total_fragments": 630,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.32",
                "min_intra_species_ani": "96.98",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 5,
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            },
            {
                "accession": "GCF_003324185.1",
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                "ani_circumscription_radius": 95.0612,
                "mean_intra_species_ani": "96.64",
                "min_intra_species_ani": "96.12",
                "mean_intra_species_af": "0.86",
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                "num_clustered_genomes": 47,
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            },
            {
                "accession": "GCA_900772565.1",
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                "matched_fragments": 477,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCF_002550015.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium",
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                "mean_intra_species_ani": "96.42",
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                "num_clustered_genomes": 7,
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            },
            {
                "accession": "GCA_003449675.1",
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            {
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            {
                "accession": "GCA_900765105.1",
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    "_bac2feature": {
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        "gram_stain": 0.0,
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        "bacillus_cell_shape": 1.0,
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "Clostridia",
        "Oscillospirales",
        "Ruminococcaceae",
        "Faecalibacterium",
        "Faecalibacterium",
        "prausnitzii",
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    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}