{
    "type": "genome",
    "identifier": "GCA_016202425.1",
    "organism": "Chloroflexota bacterium",
    "title": "Chloroflexota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Innovative Genomics Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016202425.1",
        "bioproject": "PRJNA640378",
        "biosample": "SAMN15435928",
        "wgs_master": "JACQOS000000000.1",
        "refseq_category": "na",
        "taxid": "2026724",
        "species_taxid": "2026724",
        "organism_name": "Chloroflexota bacterium",
        "infraspecific_name": "",
        "isolate": "NC_groundwater_1287_Ag_S-0.2um_66_61",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/12/21",
        "asm_name": "ASM1620242v1",
        "submitter": "Innovative Genomics Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/202/425/GCA_016202425.1_ASM1620242v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-12-21",
    "dateModified": "2020-12-21",
    "datePublished": "2020-12-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chloroflexota bacterium"
        ],
        "sample_taxid": [
            "2026724"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: California, Modesto"
        ],
        "sample_host_location_id": [],
        "data_size": "0.547 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.93,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1956992",
        "Number of Sequences": "213",
        "Longest Sequences (bp)": "36884",
        "N50 (bp)": "11887",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "66.2",
        "Number of CDSs": "1756",
        "Average Protein Length": "309.7",
        "Coding Ratio (%)": "83.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "33",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.93,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016202425.1",
                "gtdb_species": "s__JACQOS01 sp016202425",
                "ani": 100.0,
                "matched_fragments": 535,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA6952;f__JACQOS01;g__JACQOS01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_015661155.1",
                "gtdb_species": "s__JACVQK01 sp015661155",
                "ani": 76.8213,
                "matched_fragments": 77,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2985;f__UBA2985;g__JACVQK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016190445.1",
                "gtdb_species": "s__JACPQL01 sp016190445",
                "ani": 76.4742,
                "matched_fragments": 77,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__JACPQL01;f__JACPQL01;g__JACPQL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016179765.1",
                "gtdb_species": "s__JACPCL1 sp016179765",
                "ani": 76.4064,
                "matched_fragments": 98,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA6952;f__JACPCL1;g__JACPCL1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.48",
                "min_intra_species_ani": "97.48",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_011047455.1",
                "gtdb_species": "s__HRBIN24 sp011047455",
                "ani": 76.2766,
                "matched_fragments": 51,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__HRbin24;g__HRBIN24",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016210375.1",
                "gtdb_species": "s__JACQUH01 sp016210375",
                "ani": 76.2681,
                "matched_fragments": 62,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA6952;f__JACPCL1;g__JACQUH01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016190485.1",
                "gtdb_species": "s__JACPQN01 sp016190485",
                "ani": 76.1358,
                "matched_fragments": 58,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SHYD01;f__SHYD01;g__JACPQN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016210395.1",
                "gtdb_species": "s__JACPCL1 sp016210395",
                "ani": 75.7554,
                "matched_fragments": 53,
                "total_fragments": 541,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA6952;f__JACPCL1;g__JACPCL1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__QGNO01",
        "f__JACQOS01",
        "g__JACQOS01",
        "s__JACQOS01 sp016202425"
    ],
    "_genome_taxon": [
        "Chloroflexota",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Dehalococcoidia",
        "o__QGNO01",
        "f__JACQOS01",
        "g__JACQOS01",
        "s__JACQOS01 sp016202425",
        "Bacteria",
        "Chloroflexota",
        "Dehalococcoidia",
        "QGNO01",
        "JACQOS01",
        "JACQOS01",
        "JACQOS01",
        "sp016202425"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}