{ "type": "genome", "identifier": "GCA_016708085.1", "organism": "Chitinophagaceae bacterium", "title": "Chitinophagaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Aalborg University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016708085.1", "bioproject": "PRJNA629478", "biosample": "SAMN16425719", "wgs_master": "JADJGK000000000.1", "refseq_category": "na", "taxid": "1869212", "species_taxid": "1869212", "organism_name": "Chitinophagaceae bacterium", "infraspecific_name": "", "isolate": "Damh_18-Q3-R51-60_BAT3C.395", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/19", "asm_name": "ASM1670808v1", "submitter": "Aalborg University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/085/GCA_016708085.1_ASM1670808v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-19", "dateModified": "2021-01-19", "datePublished": "2021-01-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Chitinophagaceae bacterium" ], "sample_taxid": [ "1869212" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Denmark: Damhusaen" ], "sample_host_location_id": [], "data_size": "1.001 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3580314", "Number of Sequences": "25", "Longest Sequences (bp)": "465846", "N50 (bp)": "274021", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "41.9", "Number of CDSs": "3565", "Average Protein Length": "287.7", "Coding Ratio (%)": "85.9", "Number of rRNAs": "3", "Number of tRNAs": "33", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Ferruginibacter albus", "strain": "strain=KIS38-8", "accession": "GCA_020042285.1", "taxid": 2875540, "species_taxid": 2875540, "relation_to_type": "type", "validated": true, "ani": 76.4857, "matched_fragments": 113, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ginsengibacter hankyongi", "strain": "strain=BR5-29", "accession": "GCA_008710285.1", "taxid": 2607284, "species_taxid": 2607284, "relation_to_type": "type", "validated": true, "ani": 76.2805, "matched_fragments": 74, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niabella soli", "strain": "strain=JS13-8; DSM 19437", "accession": "GCA_000243115.3", "taxid": 446683, "species_taxid": 446683, "relation_to_type": "type", "validated": true, "ani": 76.2639, "matched_fragments": 55, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agriterribacter humi", "strain": "strain=YJ03", "accession": "GCA_009192765.1", "taxid": 1104781, "species_taxid": 1104781, "relation_to_type": "type", "validated": true, "ani": 76.2463, "matched_fragments": 64, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Panacibacter ginsenosidivorans", "strain": "strain=Gsoil1550", "accession": "GCA_007971225.1", "taxid": 1813871, "species_taxid": 1813871, "relation_to_type": "type", "validated": true, "ani": 76.1371, "matched_fragments": 65, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niabella pedocola", "strain": "strain=JCM 31011", "accession": "GCA_021044425.1", "taxid": 1752077, "species_taxid": 1752077, "relation_to_type": "type", "validated": true, "ani": 76.0959, "matched_fragments": 61, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Filimonas lacunae", "strain": "strain=NBRC 104114", "accession": "GCA_002355595.1", "taxid": 477680, "species_taxid": 477680, "relation_to_type": "type", "validated": true, "ani": 76.0688, "matched_fragments": 55, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sediminibacterium soli", "strain": "strain=WSJ-3", "accession": "GCA_009939225.1", "taxid": 2698829, "species_taxid": 2698829, "relation_to_type": "type", "validated": true, "ani": 76.0244, "matched_fragments": 68, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavihumibacter rivuli", "strain": "strain=IMCC34838", "accession": "GCA_018595685.2", "taxid": 2838156, "species_taxid": 2838156, "relation_to_type": "type", "validated": true, "ani": 75.9875, "matched_fragments": 58, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niastella vici", "strain": "strain=DJ57", "accession": "GCA_002077945.1", "taxid": 1703345, "species_taxid": 1703345, "relation_to_type": "type", "validated": true, "ani": 75.9522, "matched_fragments": 84, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sediminibacterium ginsengisoli", "strain": "strain=DSM 22335", "accession": "GCA_900167075.1", "taxid": 413434, "species_taxid": 413434, "relation_to_type": "type", "validated": true, "ani": 75.9154, "matched_fragments": 71, "total_fragments": 1180, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niastella caeni", "strain": "strain=HX-16-21", "accession": "GCA_004834005.1", "taxid": 2569763, "species_taxid": 2569763, "relation_to_type": "type", "validated": true, "ani": 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