{
    "type": "genome",
    "identifier": "GCA_016708265.1",
    "organism": "Saprospiraceae bacterium",
    "title": "Saprospiraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016708265.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16425708",
        "wgs_master": "JADJGA000000000.1",
        "refseq_category": "na",
        "taxid": "2202734",
        "species_taxid": "2202734",
        "organism_name": "Saprospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "Bjer_18-Q3-R1-45_MAXAC.214",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1670826v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/265/GCA_016708265.1_ASM1670826v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Saprospiraceae bacterium"
        ],
        "sample_taxid": [
            "2202734"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Bjergmarken"
        ],
        "sample_host_location_id": [],
        "data_size": "1.224 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4406903",
        "Number of Sequences": "16",
        "Longest Sequences (bp)": "1285981",
        "N50 (bp)": "841467",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "34.8",
        "Number of CDSs": "3846",
        "Average Protein Length": "319.2",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "6",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.17,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016708265.1",
                "gtdb_species": "s__JADJGA01 sp016708265",
                "ani": 100.0,
                "matched_fragments": 1460,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__JADJGA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_016714445.1",
                "gtdb_species": "s__OLB9 sp016714445",
                "ani": 75.8614,
                "matched_fragments": 57,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__OLB9",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.58",
                "min_intra_species_ani": "97.50",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.125,
        "cell_length": 0.653,
        "doubling_h": null,
        "growth_tmp": 30.0,
        "optimum_tmp": 29.062,
        "optimum_ph": 7.0,
        "genome_size": 4430689.167,
        "gc_content": 46.251,
        "coding_genes": 3955.333,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 48.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.5,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.5
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Saprospiraceae",
        "g__JADJGA01",
        "s__JADJGA01 sp016708265"
    ],
    "_genome_taxon": [
        "Saprospiraceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Saprospiraceae",
        "g__JADJGA01",
        "s__JADJGA01 sp016708265",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Saprospiraceae",
        "JADJGA01",
        "JADJGA01",
        "sp016708265"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}