{
    "type": "genome",
    "identifier": "GCA_016708275.1",
    "organism": "Chitinophagaceae bacterium",
    "title": "Chitinophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016708275.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16425707",
        "wgs_master": "JADJFZ000000000.1",
        "refseq_category": "na",
        "taxid": "1869212",
        "species_taxid": "1869212",
        "organism_name": "Chitinophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Bjer_18-Q3-R1-45_MAXAC.202",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1670827v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/275/GCA_016708275.1_ASM1670827v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophagaceae bacterium"
        ],
        "sample_taxid": [
            "1869212"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Bjergmarken"
        ],
        "sample_host_location_id": [],
        "data_size": "0.900 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3263156",
        "Number of Sequences": "9",
        "Longest Sequences (bp)": "1129230",
        "N50 (bp)": "930975",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.2",
        "Number of CDSs": "2979",
        "Average Protein Length": "323.0",
        "Coding Ratio (%)": "88.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Ferruginibacter albus",
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                "accession": "GCA_020042285.1",
                "taxid": 2875540,
                "species_taxid": 2875540,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 92,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea sandarakina",
                "strain": "strain=DSM 23241",
                "accession": "GCA_003254115.1",
                "taxid": 1004304,
                "species_taxid": 1004304,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4028,
                "matched_fragments": 54,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ginsengibacter hankyongi",
                "strain": "strain=BR5-29",
                "accession": "GCA_008710285.1",
                "taxid": 2607284,
                "species_taxid": 2607284,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3035,
                "matched_fragments": 87,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hydrotalea lipotrueae",
                "strain": "strain=TMF_100",
                "accession": "GCA_019249625.1",
                "taxid": 2803817,
                "species_taxid": 2803817,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2876,
                "matched_fragments": 71,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agriterribacter humi",
                "strain": "strain=YJ03",
                "accession": "GCA_009192765.1",
                "taxid": 1104781,
                "species_taxid": 1104781,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2558,
                "matched_fragments": 71,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Hanamia caeni",
                "strain": "strain=BO-59",
                "accession": "GCA_003721595.1",
                "taxid": 2294116,
                "species_taxid": 2294116,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0452,
                "matched_fragments": 51,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Limnovirga soli",
                "strain": "strain=KCS-6",
                "accession": "GCA_013106755.1",
                "taxid": 2656915,
                "species_taxid": 2656915,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8573,
                "matched_fragments": 80,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deminuibacter soli",
                "strain": "strain=K23C18032701",
                "accession": "GCA_003412455.1",
                "taxid": 2291815,
                "species_taxid": 2291815,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7797,
                "matched_fragments": 59,
                "total_fragments": 1084,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016699815.1",
                "gtdb_species": "s__Ferruginibacter sp002381005",
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                "matched_fragments": 1007,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.75",
                "min_intra_species_ani": "99.14",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 20,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018266715.1",
                "gtdb_species": "s__Ferruginibacter sp018266715",
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                "matched_fragments": 521,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "99.51",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016710595.1",
                "gtdb_species": "s__Ferruginibacter sp016710595",
                "ani": 77.4569,
                "matched_fragments": 242,
                "total_fragments": 1084,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001898465.1",
                "gtdb_species": "s__Ferruginibacter sp001898465",
                "ani": 77.0544,
                "matched_fragments": 226,
                "total_fragments": 1084,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_018268155.1",
                "gtdb_species": "s__Ferruginibacter sp018268155",
                "ani": 76.9338,
                "matched_fragments": 198,
                "total_fragments": 1084,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017983695.1",
                "gtdb_species": "s__Ferruginibacter sp017983695",
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                "matched_fragments": 176,
                "total_fragments": 1084,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016713965.1",
                "gtdb_species": "s__Ferruginibacter sp016713965",
                "ani": 76.6946,
                "matched_fragments": 109,
                "total_fragments": 1084,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013141115.1",
                "gtdb_species": "s__Ferruginibacter sp013141115",
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                "matched_fragments": 173,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_014379905.1",
                "gtdb_species": "s__Ferruginibacter sp014379905",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_018268135.1",
                "gtdb_species": "s__Ferruginibacter sp018268135",
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                "mean_intra_species_ani": "99.79",
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            {
                "accession": "GCA_903858475.1",
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                "mean_intra_species_ani": "99.60",
                "min_intra_species_ani": "99.32",
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                "min_intra_species_af": "0.84",
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            },
            {
                "accession": "GCA_014379625.1",
                "gtdb_species": "s__Ferruginibacter sp014379625",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ferruginibacter",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.322,
        "cell_length": 0.364,
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        "rRNA16S_genes": 3.5,
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        "vibrio_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
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        "f__Chitinophagaceae",
        "g__Ferruginibacter",
        "s__Ferruginibacter sp002381005"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Ferruginibacter",
        "s__Ferruginibacter sp002381005",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "Ferruginibacter",
        "Ferruginibacter",
        "sp002381005"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}