{
    "type": "genome",
    "identifier": "GCA_016708305.1",
    "organism": "Sphingobacteriales bacterium",
    "title": "Sphingobacteriales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016708305.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16425709",
        "wgs_master": "JADJGB000000000.1",
        "refseq_category": "na",
        "taxid": "2044944",
        "species_taxid": "2044944",
        "organism_name": "Sphingobacteriales bacterium",
        "infraspecific_name": "",
        "isolate": "Bjer_18-Q3-R1-45_MAXAC.222",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1670830v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/305/GCA_016708305.1_ASM1670830v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sphingobacteriales bacterium"
        ],
        "sample_taxid": [
            "2044944"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Bjergmarken"
        ],
        "sample_host_location_id": [],
        "data_size": "1.143 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4083520",
        "Number of Sequences": "10",
        "Longest Sequences (bp)": "2341362",
        "N50 (bp)": "2341362",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "38.7",
        "Number of CDSs": "4601",
        "Average Protein Length": "247.1",
        "Coding Ratio (%)": "83.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Niabella ginsenosidivorans",
                "strain": "strain=BS26",
                "accession": "GCA_001654455.1",
                "taxid": 1176587,
                "species_taxid": 1176587,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5186,
                "matched_fragments": 70,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella aurantiaca",
                "strain": "strain=DSM 17617",
                "accession": "GCA_000374125.1",
                "taxid": 379900,
                "species_taxid": 379900,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4824,
                "matched_fragments": 72,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella soli",
                "strain": "strain=JS13-8; DSM 19437",
                "accession": "GCA_000243115.3",
                "taxid": 446683,
                "species_taxid": 446683,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.155,
                "matched_fragments": 69,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ilyomonas limi",
                "strain": "strain=17mud1-8",
                "accession": "GCA_005233845.1",
                "taxid": 2575867,
                "species_taxid": 2575867,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1118,
                "matched_fragments": 50,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Panacibacter ginsenosidivorans",
                "strain": "strain=Gsoil1550",
                "accession": "GCA_007971225.1",
                "taxid": 1813871,
                "species_taxid": 1813871,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.09,
                "matched_fragments": 51,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella drilacis",
                "strain": "strain=DSM 25811",
                "accession": "GCA_900101395.1",
                "taxid": 1285928,
                "species_taxid": 1285928,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0869,
                "matched_fragments": 70,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella pedocola",
                "strain": "strain=JCM 31011",
                "accession": "GCA_021044425.1",
                "taxid": 1752077,
                "species_taxid": 1752077,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9894,
                "matched_fragments": 85,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella hibiscisoli",
                "strain": "strain=THG-DN5.5",
                "accession": "GCA_022512515.1",
                "taxid": 1825928,
                "species_taxid": 1825928,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8382,
                "matched_fragments": 69,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Niabella yanshanensis",
                "strain": "strain=HAMBI_3031",
                "accession": "GCA_003349965.1",
                "taxid": 577386,
                "species_taxid": 577386,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8283,
                "matched_fragments": 80,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Parafilimonas terrae",
                "strain": "strain=DSM 28286",
                "accession": "GCA_900115755.1",
                "taxid": 1465490,
                "species_taxid": 1465490,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3228,
                "matched_fragments": 52,
                "total_fragments": 1356,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.45,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016708305.1",
                "gtdb_species": "s__Niabella sp016708305",
                "ani": 100.0,
                "matched_fragments": 1355,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_001654455.1",
                "gtdb_species": "s__Niabella ginsenosidivorans",
                "ani": 76.5186,
                "matched_fragments": 70,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000374125.1",
                "gtdb_species": "s__Niabella aurantiaca",
                "ani": 76.4824,
                "matched_fragments": 72,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000243115.2",
                "gtdb_species": "s__Niabella soli",
                "ani": 76.3929,
                "matched_fragments": 70,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002399735.1",
                "gtdb_species": "s__Terrimonas sp002399735",
                "ani": 76.2391,
                "matched_fragments": 52,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Terrimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_005233845.1",
                "gtdb_species": "s__Ilyomonas limi",
                "ani": 76.1118,
                "matched_fragments": 50,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Ilyomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017744715.1",
                "gtdb_species": "s__Niabella sp017744715",
                "ani": 76.0,
                "matched_fragments": 84,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003349965.1",
                "gtdb_species": "s__Niabella yanshanensis",
                "ani": 75.813,
                "matched_fragments": 81,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018268055.1",
                "gtdb_species": "s__JJ008 sp018268055",
                "ani": 75.6807,
                "matched_fragments": 52,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__JJ008",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001898485.1",
                "gtdb_species": "s__46-32 sp001898485",
                "ani": 75.6541,
                "matched_fragments": 57,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__46-32",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.14",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_005882315.1",
                "gtdb_species": "s__VBAR01 sp005882315",
                "ani": 75.6528,
                "matched_fragments": 53,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__VBAR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017744795.1",
                "gtdb_species": "s__Niabella sp017744795",
                "ani": 75.6413,
                "matched_fragments": 52,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Niabella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_900115755.1",
                "gtdb_species": "s__Parafilimonas terrae",
                "ani": 75.3355,
                "matched_fragments": 51,
                "total_fragments": 1356,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Parafilimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.296,
        "cell_length": 0.213,
        "doubling_h": null,
        "growth_tmp": 26.56,
        "optimum_tmp": 27.687,
        "optimum_ph": 6.921,
        "genome_size": 5516848.778,
        "gc_content": 40.783,
        "coding_genes": 4585.629,
        "rRNA16S_genes": 3.875,
        "tRNA_genes": 55.222,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.144,
        "range_salinity": null,
        "facultative_respiration": 0.09,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.91,
        "mesophilic_range_tmp": 0.857,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.142,
        "bacillus_cell_shape": 0.978,
        "coccus_cell_shape": 0.021,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Niabella",
        "s__Niabella sp016708305"
    ],
    "_genome_taxon": [
        "Sphingobacteriales",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Niabella",
        "s__Niabella sp016708305",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "Niabella",
        "Niabella",
        "sp016708305"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}