{ "type": "genome", "identifier": "GCA_016708465.1", "organism": "Rhodanobacteraceae bacterium", "title": "Rhodanobacteraceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Aalborg University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016708465.1", "bioproject": "PRJNA629478", "biosample": "SAMN16425701", "wgs_master": "JADJFT000000000.1", "refseq_category": "na", "taxid": "2052182", "species_taxid": "2052182", "organism_name": "Rhodanobacteraceae bacterium", "infraspecific_name": "", "isolate": "Bjer_18-Q3-R1-45_MAXAC.099", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/19", "asm_name": "ASM1670846v1", "submitter": "Aalborg University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/465/GCA_016708465.1_ASM1670846v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-19", "dateModified": "2021-01-19", "datePublished": "2021-01-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodanobacteraceae bacterium" ], "sample_taxid": [ "2052182" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Denmark: Bjergmarken" ], "sample_host_location_id": [], "data_size": "0.898 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 99.07, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3235493", "Number of Sequences": "15", "Longest Sequences (bp)": "616581", "N50 (bp)": "345810", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.2", "Number of CDSs": "3216", "Average Protein Length": "303.7", "Coding Ratio (%)": "90.6", "Number of rRNAs": "6", "Number of tRNAs": "48", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Dokdonella koreensis", "strain": "strain=DS-123", "accession": "GCA_001632775.1", "taxid": 323415, "species_taxid": 323415, "relation_to_type": "type", "validated": true, "ani": 77.2654, "matched_fragments": 180, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas aquatica", "strain": "strain=SY21", "accession": "GCA_006337105.1", "taxid": 2202149, "species_taxid": 2202149, "relation_to_type": "type", "validated": true, "ani": 77.1409, "matched_fragments": 166, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas dokdonensis", "strain": "strain=DSM 21858", "accession": "GCA_001431405.1", "taxid": 344882, "species_taxid": 344882, "relation_to_type": "type", "validated": true, "ani": 77.093, "matched_fragments": 125, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ahniella affigens", "strain": "strain=D13", "accession": "GCA_003015185.1", "taxid": 2021234, "species_taxid": 2021234, "relation_to_type": "type", "validated": true, "ani": 77.0562, "matched_fragments": 175, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas fraxinea", "strain": "strain=D4P002", "accession": "GCA_021233355.1", "taxid": 2901869, "species_taxid": 2901869, "relation_to_type": "type", "validated": true, "ani": 77.0002, "matched_fragments": 157, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tahibacter caeni", "strain": "strain=BUT-6", "accession": "GCA_024609805.1", "taxid": 1453545, 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"matched_fragments": 174, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter arseniciresistens", "strain": "strain=ZS79", "accession": "GCA_000768335.1", "taxid": 1385522, "species_taxid": 1385522, "relation_to_type": "type", "validated": true, "ani": 76.874, "matched_fragments": 147, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas donghaensis", "strain": "strain=HO3-R19", "accession": "GCA_000743535.1", "taxid": 375061, "species_taxid": 375061, "relation_to_type": "type", "validated": true, "ani": 76.8673, "matched_fragments": 156, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dokdonella fugitiva", "strain": "strain=A3", "accession": "GCA_004342425.1", "taxid": 328517, "species_taxid": 328517, "relation_to_type": "type", "validated": true, "ani": 76.7673, "matched_fragments": 203, "total_fragments": 1072, 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{ "organism_name": "Luteibacter anthropi", "strain": "strain=CCUG 25036", "accession": "GCA_011759365.1", "taxid": 564369, "species_taxid": 564369, "relation_to_type": "type", "validated": true, "ani": 76.6991, "matched_fragments": 97, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oleiagrimonas soli", "strain": "strain=3.5X", "accession": "GCA_000761445.1", "taxid": 1543381, "species_taxid": 1543381, "relation_to_type": "type", "validated": true, "ani": 76.6871, "matched_fragments": 147, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas phaseoli", "strain": "strain=CFBP2534", "accession": "GCA_017745345.1", "taxid": 1985254, "species_taxid": 1985254, "relation_to_type": "pathovar", "validated": true, "ani": 76.6293, "matched_fragments": 116, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthomonas phaseoli", "strain": 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