{
    "type": "genome",
    "identifier": "GCA_016708935.1",
    "organism": "Cytophagaceae bacterium",
    "title": "Cytophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016708935.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16425679",
        "wgs_master": "JADJEX000000000.1",
        "refseq_category": "na",
        "taxid": "2026729",
        "species_taxid": "2026729",
        "organism_name": "Cytophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "Bjer_18-Q3-R1-45_BATAC.113",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1670893v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/935/GCA_016708935.1_ASM1670893v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cytophagaceae bacterium"
        ],
        "sample_taxid": [
            "2026729"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Bjergmarken"
        ],
        "sample_host_location_id": [],
        "data_size": "1.467 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5264529",
        "Number of Sequences": "36",
        "Longest Sequences (bp)": "894873",
        "N50 (bp)": "542458",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.1",
        "Number of CDSs": "5572",
        "Average Protein Length": "260.7",
        "Coding Ratio (%)": "82.8",
        "Number of rRNAs": "11",
        "Number of tRNAs": "44",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 316068,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacihabitans soyangensis",
                "strain": "strain=KCTC23259",
                "accession": "GCA_024343775.1",
                "taxid": 869394,
                "species_taxid": 869394,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Marinilongibacter aquaticus",
                "strain": "strain=YYF0007",
                "accession": "GCA_020149935.1",
                "taxid": 2975157,
                "species_taxid": 2975157,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Jiulongibacter sediminis",
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                "accession": "GCA_004329705.1",
                "taxid": 1605367,
                "species_taxid": 1605367,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4143,
                "matched_fragments": 50,
                "total_fragments": 1733,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Emticicia aquatilis",
                "strain": "strain=CGMCC 1.15958",
                "accession": "GCA_014644295.1",
                "taxid": 1537369,
                "species_taxid": 1537369,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0594,
                "matched_fragments": 93,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Emticicia agri",
                "strain": "strain=17J42-9",
                "accession": "GCA_004168285.1",
                "taxid": 2492393,
                "species_taxid": 2492393,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8977,
                "matched_fragments": 63,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Emticicia aquatica",
                "strain": "strain=CECT 8858, type strain",
                "accession": "GCA_923079645.1",
                "taxid": 1681835,
                "species_taxid": 1681835,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4898,
                "matched_fragments": 80,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium psychroterrae",
                "strain": "strain=CCM 8827",
                "accession": "GCA_018380615.1",
                "taxid": 2133767,
                "species_taxid": 2133767,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8527,
                "matched_fragments": 50,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016722655.1",
                "gtdb_species": "s__Leadbetterella sp016722655",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Leadbetterella",
                "ani_circumscription_radius": 95.0,
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                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_002256295.1",
                "gtdb_species": "s__Leadbetterella sp002256295",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Leadbetterella",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_009905725.1",
                "gtdb_species": "s__Leadbetterella sp002483125",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Leadbetterella",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002855535.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_017495105.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_005280585.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Dyadobacter",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.232,
        "cell_length": 0.526,
        "doubling_h": null,
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        "genome_size": 6461989.452,
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        "coding_genes": 5174.515,
        "rRNA16S_genes": 2.888,
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        "gram_stain": 0.0,
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        "range_salinity": 1.0,
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        "mesophilic_range_tmp": 0.875,
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        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
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        "coccobacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Cytophagales",
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        "g__Leadbetterella",
        "s__Leadbetterella sp016722655"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Cytophagales",
        "f__Spirosomataceae",
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        "s__Leadbetterella sp016722655",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Cytophagales",
        "Spirosomataceae",
        "Leadbetterella",
        "Leadbetterella",
        "sp016722655"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}