{
    "type": "genome",
    "identifier": "GCA_016708985.1",
    "organism": "Flavobacteriales bacterium",
    "title": "Flavobacteriales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016708985.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16425672",
        "wgs_master": "JADJER000000000.1",
        "refseq_category": "na",
        "taxid": "2021391",
        "species_taxid": "2021391",
        "organism_name": "Flavobacteriales bacterium",
        "infraspecific_name": "",
        "isolate": "Bjer_18-Q3-R1-45_BAT3C.224",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1670898v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/708/985/GCA_016708985.1_ASM1670898v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Flavobacteriales bacterium"
        ],
        "sample_taxid": [
            "2021391"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Bjergmarken"
        ],
        "sample_host_location_id": [],
        "data_size": "1.216 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4293318",
        "Number of Sequences": "3",
        "Longest Sequences (bp)": "2152179",
        "N50 (bp)": "2152179",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "50.3",
        "Number of CDSs": "3657",
        "Average Protein Length": "346.2",
        "Coding Ratio (%)": "88.5",
        "Number of rRNAs": "3",
        "Number of tRNAs": "37",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016704485.1",
                "gtdb_species": "s__PHOS-HE28 sp016704485",
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                "matched_fragments": 1384,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.65",
                "min_intra_species_ani": "99.54",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_017987115.1",
                "gtdb_species": "s__PHOS-HE28 sp017987115",
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                "matched_fragments": 910,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016705955.1",
                "gtdb_species": "s__PHOS-HE28 sp016705955",
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                "matched_fragments": 170,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016717305.1",
                "gtdb_species": "s__PHOS-HE28 sp016717305",
                "ani": 77.8976,
                "matched_fragments": 241,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "99.05",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016710015.1",
                "gtdb_species": "s__PHOS-HE28 sp016710015",
                "ani": 77.5929,
                "matched_fragments": 204,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.59",
                "min_intra_species_ani": "99.44",
                "mean_intra_species_af": "0.96",
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                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_016718655.1",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_014584605.1",
                "gtdb_species": "s__PHOS-HE28 sp014584605",
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                "matched_fragments": 59,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_018267065.1",
                "gtdb_species": "s__PHOS-HE28 sp018267065",
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                "matched_fragments": 62,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902826215.1",
                "gtdb_species": "s__PHOS-HE28 sp902826215",
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                "matched_fragments": 198,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_016717225.1",
                "gtdb_species": "s__PHOS-HE28 sp016717225",
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                "matched_fragments": 115,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_af": "0.88",
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            },
            {
                "accession": "GCA_016788205.1",
                "gtdb_species": "s__PHOS-HE28 sp016788205",
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                "matched_fragments": 147,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002360495.1",
                "gtdb_species": "s__PHOS-HE28 sp002360495",
                "ani": 76.735,
                "matched_fragments": 131,
                "total_fragments": 1429,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
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                "mean_intra_species_ani": "97.35",
                "min_intra_species_ani": "97.35",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
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            },
            {
                "accession": "GCA_018266685.1",
                "gtdb_species": "s__PHOS-HE28 sp018266685",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__PHOS-HE28;g__PHOS-HE28",
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                "mean_intra_species_ani": "99.70",
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                "mean_intra_species_af": "0.93",
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            {
                "accession": "GCA_018057455.1",
                "gtdb_species": "s__PHOS-HE28 sp018057455",
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            },
            {
                "accession": "GCA_016713865.1",
                "gtdb_species": "s__PHOS-HE28 sp016713865",
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                "mean_intra_species_ani": "N/A",
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                "accession": "GCA_016787995.1",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.337,
        "cell_length": 0.308,
        "doubling_h": 1.285,
        "growth_tmp": 26.455,
        "optimum_tmp": 26.685,
        "optimum_ph": 7.271,
        "genome_size": 3861663.667,
        "gc_content": 35.517,
        "coding_genes": 2961.142,
        "rRNA16S_genes": 3.684,
        "tRNA_genes": 48.763,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.372,
        "range_salinity": 0.615,
        "facultative_respiration": 0.042,
        "anaerobic_respiration": 0.012,
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        "mesophilic_range_tmp": 0.898,
        "thermophilic_range_tmp": 0.0,
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        "bacillus_cell_shape": 0.982,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.002,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__PHOS-HE28",
        "g__PHOS-HE28",
        "s__PHOS-HE28 sp016704485"
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    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__PHOS-HE28",
        "g__PHOS-HE28",
        "s__PHOS-HE28 sp016704485",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "PHOS-HE28",
        "PHOS-HE28",
        "PHOS-HE28",
        "sp016704485"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}