{ "tc_result": [ { "organism_name": "Aquisediminimonas profunda", "strain": "strain=DS48-3", "accession": "GCA_019443285.1", "taxid": 1550733, "species_taxid": 1550733, "relation_to_type": "type", "validated": true, "ani": 87.2796, "matched_fragments": 692, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas changnyeongensis", "strain": "strain=C33", "accession": "GCA_009913435.1", "taxid": 2698679, "species_taxid": 2698679, "relation_to_type": "type", "validated": true, "ani": 77.6235, "matched_fragments": 166, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium wenxiniae", "strain": "strain=JZ-1", "accession": "GCA_014205735.1", "taxid": 595605, "species_taxid": 595605, "relation_to_type": "type", "validated": true, "ani": 77.5306, "matched_fragments": 152, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas gilva", "strain": "strain=ZDH117", "accession": "GCA_003515075.1", "taxid": 2305907, "species_taxid": 2305907, "relation_to_type": "type", "validated": true, "ani": 77.3817, "matched_fragments": 157, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter tenebrarum", "strain": "strain=zrk23", "accession": "GCA_011057975.1", "taxid": 2711215, "species_taxid": 2711215, "relation_to_type": "type", "validated": true, "ani": 77.3358, "matched_fragments": 153, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas colocasiae", "strain": "strain=JCM 31229", "accession": "GCA_019880585.1", "taxid": 1848973, "species_taxid": 1848973, "relation_to_type": "type", "validated": true, "ani": 77.3232, "matched_fragments": 195, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium kunmingense", "strain": "strain=CGMCC 1.12274", "accession": "GCA_002813245.1", "taxid": 1211806, "species_taxid": 1211806, "relation_to_type": "type", "validated": true, "ani": 77.2953, "matched_fragments": 117, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinicella ginsenosidimutans", "strain": "strain=BS-11", "accession": "GCA_007995055.1", "taxid": 1176539, "species_taxid": 1176539, "relation_to_type": "type", "validated": true, "ani": 77.2803, "matched_fragments": 134, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pokkalii", "strain": "strain=L3B27", "accession": "GCA_003096275.1", "taxid": 2175090, "species_taxid": 2175090, "relation_to_type": "type", "validated": true, "ani": 77.2635, "matched_fragments": 151, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas gei", "strain": "strain=ZFGT-11", "accession": "GCA_004792685.1", "taxid": 1395960, "species_taxid": 1395960, "relation_to_type": "type", "validated": true, "ani": 77.2492, "matched_fragments": 134, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tsuneonella amylolytica", "strain": "strain=NS1", "accession": "GCA_003626915.1", "taxid": 2338327, "species_taxid": 2338327, "relation_to_type": "type", "validated": true, "ani": 77.2095, "matched_fragments": 94, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas jejuensis", "strain": "strain=DSM 27651", "accession": "GCA_011927695.1", "taxid": 904715, "species_taxid": 904715, "relation_to_type": "type", "validated": true, "ani": 77.1915, "matched_fragments": 109, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisediminimonas sediminicola", "strain": "strain=CH68-4", "accession": "GCA_019740335.1", "taxid": 2676787, "species_taxid": 2676787, "relation_to_type": "type", "validated": true, "ani": 77.152, "matched_fragments": 128, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas spermidinifaciens", "strain": "strain=9NM-10", "accession": "GCA_002351485.1", "taxid": 1141889, "species_taxid": 1141889, "relation_to_type": "type", "validated": true, "ani": 77.1467, "matched_fragments": 124, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizorhabdus phycosphaerae", "strain": "strain=MK52", "accession": "GCA_011044255.1", "taxid": 2711156, "species_taxid": 2711156, "relation_to_type": "type", "validated": true, "ani": 77.0855, "matched_fragments": 144, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinicella humi", "strain": "strain=QZX222", "accession": "GCA_003129465.1", "taxid": 2068657, "species_taxid": 2068657, "relation_to_type": "type", "validated": true, "ani": 77.0516, "matched_fragments": 129, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas hengshuiensis", "strain": "strain=WHSC-8", "accession": "GCA_000935025.1", "taxid": 1609977, "species_taxid": 1609977, "relation_to_type": "type", "validated": true, "ani": 77.0468, "matched_fragments": 169, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas morindae", "strain": "strain=NBD5", "accession": "GCA_023822065.1", "taxid": 1541170, "species_taxid": 1541170, "relation_to_type": "type", "validated": true, "ani": 77.0272, "matched_fragments": 131, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium aquimarinum", "strain": "strain=M24A2M", "accession": "GCA_009746585.1", "taxid": 2682494, "species_taxid": 2682494, "relation_to_type": "type", "validated": true, "ani": 77.0214, "matched_fragments": 112, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium jiangsuense", "strain": "strain=DSM 26189", "accession": "GCA_014196495.1", "taxid": 870476, "species_taxid": 870476, "relation_to_type": "type", "validated": true, "ani": 77.0196, "matched_fragments": 174, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pituitosa", "strain": "strain=NBRC 102491", "accession": "GCA_001598435.1", "taxid": 99597, "species_taxid": 99597, "relation_to_type": "type", "validated": true, "ani": 76.8879, "matched_fragments": 143, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas paeninsulae", "strain": "strain=YZ-8", "accession": "GCA_003660165.1", "taxid": 2319844, "species_taxid": 2319844, "relation_to_type": "type", "validated": true, "ani": 76.7859, "matched_fragments": 107, "total_fragments": 1059, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 94.44, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_016704425.1", "gtdb_species": "s__Chakrabartia sp016704425", "ani": 99.5257, "matched_fragments": 994, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Chakrabartia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "97.63", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.86", "num_clustered_genomes": 10, "status": "conclusive" }, { "accession": "GCA_005518185.1", "gtdb_species": "s__Chakrabartia godavariana", "ani": 77.9924, "matched_fragments": 233, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Chakrabartia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000512205.2", "gtdb_species": "s__Sphingomonas_D sanxanigenens", "ani": 77.5336, "matched_fragments": 172, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009753715.1", "gtdb_species": "s__Sphingomonas_B horti", "ani": 77.5042, "matched_fragments": 159, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_001724715.1", "gtdb_species": "s__SCN-67-18 sp001724715", "ani": 77.5033, "matched_fragments": 169, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__SCN-67-18", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003355005.1", "gtdb_species": "s__Sphingomonas sp003355005", "ani": 77.4931, "matched_fragments": 142, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000281715.1", "gtdb_species": "s__Sphingobium sp000281715", "ani": 77.3661, "matched_fragments": 145, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003515075.1", "gtdb_species": "s__Sphingomonas gilva", "ani": 77.3632, "matched_fragments": 158, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_006438735.1", "gtdb_species": "s__Sphingomonas koreensis_A", "ani": 77.3593, "matched_fragments": 146, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.05", "min_intra_species_ani": "96.05", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.80", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002280555.1", "gtdb_species": "s__Sphingomonas sp002280555", "ani": 77.358, "matched_fragments": 124, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.55", "min_intra_species_ani": "97.47", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001468225.1", "gtdb_species": "s__Sphingopyxis sp001468225", "ani": 77.3555, "matched_fragments": 169, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.96", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_011057975.1", "gtdb_species": "s__Sphingomonas sp011057975", "ani": 77.3358, "matched_fragments": 153, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000974765.1", "gtdb_species": "s__Sphingomonas_B changbaiensis", "ani": 77.2718, "matched_fragments": 151, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002953135.1", "gtdb_species": "s__Sphingobium sp002953135", "ani": 77.2569, "matched_fragments": 109, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004792685.1", "gtdb_species": "s__Sphingomonas gei", "ani": 77.2492, "matched_fragments": 134, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011927695.1", "gtdb_species": "s__Sphingomonas_K jejuensis", "ani": 77.1915, "matched_fragments": 109, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas_K", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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"num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003660165.1", "gtdb_species": "s__UBA1936 sp003660165", "ani": 76.7859, "matched_fragments": 107, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__UBA1936", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002281485.1", "gtdb_species": "s__Sphingomonas sp002281485", "ani": 76.7426, "matched_fragments": 142, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009885425.1", "gtdb_species": "s__Novosphingobium sp009885425", "ani": 76.7178, "matched_fragments": 62, "total_fragments": 1059, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }