{
    "type": "genome",
    "identifier": "GCA_016721345.1",
    "organism": "Ignavibacteria bacterium",
    "title": "Ignavibacteria bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Aalborg University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_016721345.1",
        "bioproject": "PRJNA629478",
        "biosample": "SAMN16426494",
        "wgs_master": "JADKII000000000.1",
        "refseq_category": "na",
        "taxid": "2053306",
        "species_taxid": "2053306",
        "organism_name": "Ignavibacteria bacterium",
        "infraspecific_name": "",
        "isolate": "Skiv_18-Q3-R9-52_MAXAC.018",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/19",
        "asm_name": "ASM1672134v1",
        "submitter": "Aalborg University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/721/345/GCA_016721345.1_ASM1672134v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-19",
    "dateModified": "2021-01-19",
    "datePublished": "2021-01-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Ignavibacteria bacterium"
        ],
        "sample_taxid": [
            "2053306"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Denmark: Skive"
        ],
        "sample_host_location_id": [],
        "data_size": "1.140 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.37,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4121994",
        "Number of Sequences": "22",
        "Longest Sequences (bp)": "1175643",
        "N50 (bp)": "378876",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "35.5",
        "Number of CDSs": "3845",
        "Average Protein Length": "301.1",
        "Coding Ratio (%)": "84.3",
        "Number of rRNAs": "2",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.37,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016709315.1",
                "gtdb_species": "s__JAEUSI01 sp016709315",
                "ani": 98.4674,
                "matched_fragments": 1243,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAEUSI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.01",
                "min_intra_species_ani": "96.43",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 8,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018266895.1",
                "gtdb_species": "s__JAEUSI01 sp018266895",
                "ani": 82.8791,
                "matched_fragments": 800,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAEUSI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016788375.1",
                "gtdb_species": "s__JAEUSI01 sp016788375",
                "ani": 77.1378,
                "matched_fragments": 338,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAEUSI01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016719565.1",
                "gtdb_species": "s__UBA2330 sp016719565",
                "ani": 76.8501,
                "matched_fragments": 297,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__UBA2330",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016716125.1",
                "gtdb_species": "s__UBA2330 sp016716125",
                "ani": 76.6765,
                "matched_fragments": 264,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__UBA2330",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018266875.1",
                "gtdb_species": "s__UBA2330 sp018266875",
                "ani": 76.6373,
                "matched_fragments": 215,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__UBA2330",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002344965.1",
                "gtdb_species": "s__UBA2330 sp002344965",
                "ani": 76.3636,
                "matched_fragments": 223,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__UBA2330",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.89",
                "min_intra_species_ani": "99.88",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016218085.1",
                "gtdb_species": "s__FEN-1279 sp016218085",
                "ani": 75.5956,
                "matched_fragments": 61,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__FEN-1279",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018266835.1",
                "gtdb_species": "s__JAFDZO01 sp018266835",
                "ani": 75.4013,
                "matched_fragments": 102,
                "total_fragments": 1361,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__SJA-28;f__B-1AR;g__JAFDZO01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Ignavibacteria",
        "o__SJA-28",
        "f__B-1AR",
        "g__JAEUSI01",
        "s__JAEUSI01 sp016709315"
    ],
    "_genome_taxon": [
        "Ignavibacteria",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Ignavibacteria",
        "o__SJA-28",
        "f__B-1AR",
        "g__JAEUSI01",
        "s__JAEUSI01 sp016709315",
        "Bacteria",
        "Bacteroidota",
        "Ignavibacteria",
        "SJA-28",
        "B-1AR",
        "JAEUSI01",
        "JAEUSI01",
        "sp016709315"
    ],
    "_meo": [
        {
            "id": "MEO_0000014",
            "label": "activated sludge"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}