{ "type": "genome", "identifier": "GCA_016721965.1", "organism": "Rhodocyclaceae bacterium", "title": "Rhodocyclaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Aalborg University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016721965.1", "bioproject": "PRJNA629478", "biosample": "SAMN16426460", "wgs_master": "JADKHB000000000.1", "refseq_category": "na", "taxid": "1898103", "species_taxid": "1898103", "organism_name": "Rhodocyclaceae bacterium", "infraspecific_name": "", "isolate": "Skiv_18-Q3-R9-52_BAT3C.148", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/19", "asm_name": "ASM1672196v1", "submitter": "Aalborg University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/721/965/GCA_016721965.1_ASM1672196v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-19", "dateModified": "2021-01-19", "datePublished": "2021-01-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodocyclaceae bacterium" ], "sample_taxid": [ "1898103" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Denmark: Skive" ], "sample_host_location_id": [], "data_size": "1.016 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 97.92, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3702314", "Number of Sequences": "15", "Longest Sequences 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"strain": "strain=DSM 13999", "accession": "GCA_001586935.1", "taxid": 157592, "species_taxid": 157592, "relation_to_type": "type", "validated": true, "ani": 78.6801, "matched_fragments": 113, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 78.543, "matched_fragments": 388, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azonexus fungiphilus", "strain": "strain=DSM 23841", "accession": "GCA_003634965.1", "taxid": 146940, "species_taxid": 146940, "relation_to_type": "type", "validated": true, "ani": 78.3512, "matched_fragments": 359, "total_fragments": 1229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB1", "accession": "GCA_001922305.1", 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