{ "type": "genome", "identifier": "GCA_016794765.1", "organism": "Spirochaetaceae bacterium", "title": "Spirochaetaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Micoorganism", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016794765.1", "bioproject": "PRJNA592128", "biosample": "SAMN17180946", "wgs_master": "JAEUJG000000000.1", "refseq_category": "na", "taxid": "1898206", "species_taxid": "1898206", "organism_name": "Spirochaetaceae bacterium", "infraspecific_name": "", "isolate": "new MAG-63", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/01", "asm_name": "ASM1679476v1", "submitter": "Micoorganism", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/794/765/GCA_016794765.1_ASM1679476v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-01", "dateModified": "2021-02-01", "datePublished": "2021-02-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Spirochaetaceae bacterium" ], "sample_taxid": [ "1898206" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Nanjing" ], "sample_host_location_id": [], "data_size": "1.012 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 91.29, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3704643", "Number of Sequences": "651", "Longest Sequences (bp)": "31947", "N50 (bp)": "7468", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "68.6", "Number of CDSs": "2679", "Average Protein Length": "327.4", "Coding Ratio (%)": "71.0", "Number of rRNAs": "1", "Number of tRNAs": "40", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Geothrix fermentans", "strain": "strain=DSM 14018", "accession": "GCA_000428885.1", "taxid": 44676, "species_taxid": 44676, "relation_to_type": "type", "validated": true, "ani": 75.2868, "matched_fragments": 54, "total_fragments": 891, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Inmirania thermothiophila", "strain": "strain=DSM 100275", "accession": "GCA_003751635.1", "taxid": 1750597, "species_taxid": 1750597, "relation_to_type": "type", "validated": true, "ani": 75.1468, "matched_fragments": 90, "total_fragments": 891, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga subterranea", "strain": "strain=DSM 14364", "accession": "GCA_003350535.1", "taxid": 186651, "species_taxid": 186651, "relation_to_type": "type", "validated": true, "ani": 75.0726, "matched_fragments": 63, "total_fragments": 891, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquibium microcysteis", "strain": "strain=NIBR3", "accession": "GCA_014495845.1", "taxid": 675281, "species_taxid": 675281, "relation_to_type": "type", "validated": true, "ani": 74.9657, "matched_fragments": 69, "total_fragments": 891, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hansschlegelia beijingensis", "strain": "strain=DSM 25481", "accession": "GCA_014196425.1", "taxid": 1133344, "species_taxid": 1133344, "relation_to_type": "type", "validated": true, "ani": 74.9195, "matched_fragments": 59, "total_fragments": 891, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinacidiphila guanduensis", "strain": "strain=CGMCC 4.2022", "accession": "GCA_900103985.1", "taxid": 310781, 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