{ "type": "genome", "identifier": "GCA_016795185.1", "organism": "Planctomycetia bacterium", "title": "Planctomycetia bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Micoorganism", "publication": [ {} ], "properties": { "assembly_accession": "GCA_016795185.1", "bioproject": "PRJNA592128", "biosample": "SAMN17180919", "wgs_master": "JAEUIF000000000.1", "refseq_category": "na", "taxid": "2052181", "species_taxid": "2052181", "organism_name": "Planctomycetia bacterium", "infraspecific_name": "", "isolate": "new MAG-36", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/01", "asm_name": "ASM1679518v1", "submitter": "Micoorganism", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/016/795/185/GCA_016795185.1_ASM1679518v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-01", "dateModified": "2021-02-01", "datePublished": "2021-02-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Planctomycetia bacterium" ], "sample_taxid": [ "2052181" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Nanjing" ], "sample_host_location_id": [], "data_size": "2.653 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.31, "contamination": 8.33, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "9502045", "Number of Sequences": "1500", "Longest Sequences (bp)": "38796", "N50 (bp)": "8405", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.1", "Number of CDSs": "6789", "Average Protein Length": "335.6", "Coding Ratio (%)": "71.9", "Number of rRNAs": "0", "Number of tRNAs": "66", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Urbifossiella limnaea", "strain": "strain=ETA_A1", "accession": "GCA_007747215.1", "taxid": 2528023, "species_taxid": 2528023, "relation_to_type": "type", "validated": true, "ani": 75.946, "matched_fragments": 342, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limnoglobus roseus", "strain": "strain=PX52", "accession": "GCA_008254045.1", "taxid": 2598579, "species_taxid": 2598579, "relation_to_type": "type", "validated": true, "ani": 75.817, "matched_fragments": 253, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisphaera giovannonii", "strain": "strain=OJF2", "accession": "GCA_008087625.1", "taxid": 406548, "species_taxid": 406548, "relation_to_type": "type", "validated": true, "ani": 75.7304, "matched_fragments": 195, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludisphaera borealis", "strain": "strain=PX4", "accession": "GCA_001956985.1", "taxid": 1387353, "species_taxid": 1387353, "relation_to_type": "type", "validated": true, "ani": 75.6808, "matched_fragments": 197, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "strain=UQM 2246", "accession": "GCA_000171775.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 75.6628, "matched_fragments": 211, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmata obscuriglobus", "strain": "", "accession": "GCA_901538385.1", "taxid": 114, "species_taxid": 114, "relation_to_type": "type", "validated": true, "ani": 75.6246, "matched_fragments": 230, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Posidoniimonas polymericola", "strain": "strain=Pla123a", "accession": "GCA_007859935.1", "taxid": 2528002, "species_taxid": 2528002, "relation_to_type": "type", "validated": true, "ani": 75.6002, "matched_fragments": 117, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fimbriiglobus ruber", "strain": "strain=SP5", "accession": "GCA_002197845.1", "taxid": 1908690, "species_taxid": 1908690, "relation_to_type": "type", "validated": true, "ani": 75.5963, "matched_fragments": 195, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludisphaera soli", "strain": "strain=JC670", "accession": "GCA_011064595.1", "taxid": 2712865, "species_taxid": 2712865, "relation_to_type": "type", "validated": true, "ani": 75.5333, "matched_fragments": 203, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tautonia sociabilis", "strain": "strain=GM2012", "accession": "GCA_003977685.1", "taxid": 2080755, "species_taxid": 2080755, "relation_to_type": "type", "validated": true, "ani": 75.4387, "matched_fragments": 167, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paludisphaera rhizosphaereae", "strain": "strain=JC665", "accession": "GCA_011065895.1", "taxid": 2711216, "species_taxid": 2711216, "relation_to_type": "type", "validated": true, "ani": 75.4137, "matched_fragments": 163, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zavarzinella formosa", "strain": "strain=DSM 19928", "accession": "GCA_000255705.1", "taxid": 360055, "species_taxid": 360055, "relation_to_type": "type", "validated": true, "ani": 75.4041, "matched_fragments": 130, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tautonia plasticadhaerens", "strain": "strain=ElP", "accession": "GCA_007752535.1", "taxid": 2527974, "species_taxid": 2527974, "relation_to_type": "type", "validated": true, "ani": 75.3436, "matched_fragments": 206, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xanthobacter autotrophicus", "strain": "strain=DSM 432", "accession": "GCA_005871085.1", "taxid": 280, "species_taxid": 280, "relation_to_type": "type", "validated": true, "ani": 74.8319, "matched_fragments": 109, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia enhydra", "strain": "strain=ATCC 23634", "accession": "GCA_900119845.1", "taxid": 665118, "species_taxid": 665118, "relation_to_type": "type", "validated": true, "ani": 74.794, "matched_fragments": 58, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardia barduliensis", "strain": "strain=335427", "accession": "GCA_013315795.1", "taxid": 2736643, "species_taxid": 2736643, "relation_to_type": "type", "validated": true, "ani": 74.7486, "matched_fragments": 129, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinoplanes abujensis", "strain": "strain=DSM 45518", "accession": "GCA_014204895.1", "taxid": 882441, "species_taxid": 882441, "relation_to_type": "type", "validated": true, "ani": 74.7483, "matched_fragments": 195, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbidospora solisilvae", "strain": "strain=NEAU-GS84", "accession": "GCA_009901565.1", "taxid": 2696284, "species_taxid": 2696284, "relation_to_type": "type", "validated": true, "ani": 74.7394, "matched_fragments": 180, "total_fragments": 2384, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardia beijingensis", "strain": "strain=NBRC 16342", "accession": "GCA_001612785.1", "taxid": 95162, 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